Cow genome map


           Conread name:
           Ss1.1-rpldo0109_h4.5
        

               Conread position:
               1-496
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               209, 220
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               1-542
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 121
               

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               328
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               131, 146
               

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               330
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               127, 132
               

               Conread position:
               1-545
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               340
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 132
               

               Conread position:
               1-559
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               346
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               121, 132
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 281
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 115
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               345
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               126, 132
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               127, 146
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 146
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 115
               

               Conread position:
               2-542
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               324
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               120, 131
               

               Conread position:
               2-576
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               340
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 131
               

               Conread position:
               2-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               348
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               87, 97
               

               Conread position:
               2-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-543
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 216
               

               Conread position:
               5-542
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               337
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               123, 117
               

               Conread position:
               5-543
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 113
               

               Conread position:
               5-545
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 128
               

               Conread position:
               5-576
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               353
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               117, 128
               

               Conread position:
               9-576
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               182, 161
               

               Conread position:
               9-576
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               342
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               286, 277
               

               Conread position:
               29-545
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 167
               

               Conread position:
               84-547
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               87-507
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               87-576
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 110
               

               Conread position:
               181-576
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 13
               

               Conread position:
               313-543
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               334-576
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.