Cow genome map


           Conread name:
           Ss1.1-rpldo0109_h4.5
        

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               185, 199
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               321
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               128, 121
               

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               114, 132
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               336
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               43, 48
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 204
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               350
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               182, 195
               

               Conread position:
               2-541
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               186, 209
               

               Conread position:
               2-547
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 131
               

               Conread position:
               5-543
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 126
               

               Conread position:
               5-576
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               352
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               123, 128
               

               Conread position:
               8-527
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               329
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               20-576
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               332
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               60-543
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               305
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               126, 136
               

               Conread position:
               87-519
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               91-575
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               132-576
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               166-545
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               219-540
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               74, 78
               

               Conread position:
               220-547
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 72
               

               Conread position:
               237-540
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               240-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 53
               

               Conread position:
               272-540
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               169, 165
               

               Conread position:
               275-547
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 111
               

               Conread position:
               328-575
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.