Cow genome map
| Conread name: | Ss1.1-rpldo0111_g3.5 |
| Conread position: | 6-809 |
| Cow position: | chr2:78755227-78756042 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 7-836 |
| Cow position: | chr2:82799585-82800431 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 15-809 |
| Cow position: | chr2:78755402-78756211 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 15-812 |
| Cow position: | chr2:78754899-78755709 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 15-812 |
| Cow position: | chr2:78755067-78755877 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 16-804 |
| Cow position: | chr2:78755570-78756371 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 42-746 |
| Cow position: | chr2:78754109-78754819 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 441 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 56-848 |
| Cow position: | chr2:82799466-82800275 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 705 |
| Conread position: | 210-848 |
| Cow position: | chr2:78754772-78755412 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 285-728 |
| Cow position: | chr2:86465704-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 285-735 |
| Cow position: | chr2:48689523-48689074 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 108 |
| Conread position: | 285-776 |
| Cow position: | chr2:5875080-5874589 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 136, 115 |
| Conread position: | 285-812 |
| Cow position: | chr2:86465284-86465811 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 282, 287 |
| Conread position: | 288-697 |
| Cow position: | chr2:5875161-5874752 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 288-768 |
| Cow position: | chr2:82799967-82800447 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 288-809 |
| Cow position: | chr2:78755773-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 327 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 288-848 |
| Cow position: | chr2:78754118-78754673 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 197, 52 |
| Conread position: | 288-848 |
| Cow position: | chr2:82799547-82800107 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 289-760 |
| Cow position: | chr2:5874572-5874101 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 290-813 |
| Cow position: | chr2:86465541-86466064 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 306 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 291-804 |
| Cow position: | chr2:78754202-78754712 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 187, 208 |
| Conread position: | 292-601 |
| Cow position: | chr2:82800139-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 292-815 |
| Cow position: | chr2:82799467-82799990 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 200 |
| Conread position: | 297-809 |
| Cow position: | chr2:86465128-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 336-827 |
| Cow position: | chr2:86465671-86466162 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 346-703 |
| Cow position: | chr2:78756084-78756437 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 351-776 |
| Cow position: | chr2:5874846-5874421 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 136 |
| Conread position: | 352-720 |
| Cow position: | chr2:48689540-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 124, 134 |
| Conread position: | 353-752 |
| Cow position: | chr2:5875180-5874781 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 131, 123 |
| Conread position: | 355-809 |
| Cow position: | chr2:78754101-78754550 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 362-812 |
| Cow position: | chr2:82799453-82799903 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-799 |
| Cow position: | chr2:86465036-86465462 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 436-805 |
| Cow position: | chr2:48689540-48689172 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 447-848 |
| Cow position: | chr2:82799454-82799855 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 530-814 |
| Cow position: | chr2:82799453-82799737 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.