Cow genome map

Conread name: Ss1.1-rpldo0111_g3.5

Conread position: 4-497
Cow position:
Alignm length: 512
Alignm identity: 313
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 146

Conread position: 15-839
Cow position:
Alignm length: 845
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 135

Conread position: 15-839
Cow position:
Alignm length: 847
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 15-844
Cow position:
Alignm length: 851
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 15-844
Cow position:
Alignm length: 849
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 167

Conread position: 15-848
Cow position:
Alignm length: 854
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 18-834
Cow position:
Alignm length: 847
Alignm identity: 511
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 129

Conread position: 20-697
Cow position:
Alignm length: 699
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 134

Conread position: 20-773
Cow position:
Alignm length: 772
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 23-777
Cow position:
Alignm length: 777
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 24-812
Cow position:
Alignm length: 808
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 24-812
Cow position:
Alignm length: 807
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 127

Conread position: 30-848
Cow position:
Alignm length: 842
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 6

Conread position: 74-712
Cow position:
Alignm length: 656
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 268

Conread position: 199-848
Cow position:
Alignm length: 665
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 285-818
Cow position:
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 210

Conread position: 288-546
Cow position:
Alignm length: 260
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 35

Conread position: 289-505
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 199, 0

Conread position: 289-624
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 105

Conread position: 289-784
Cow position:
Alignm length: 496
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 289-796
Cow position:
Alignm length: 508
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 0

Conread position: 289-848
Cow position:
Alignm length: 562
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 184

Conread position: 292-809
Cow position:
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 452

Conread position: 292-848
Cow position:
Alignm length: 559
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 371

Conread position: 296-839
Cow position:
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 8

Conread position: 346-848
Cow position:
Alignm length: 504
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 350-714
Cow position:
Alignm length: 367
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 121

Conread position: 364-575
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 100

Conread position: 364-844
Cow position:
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 419-811
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 155

Conread position: 434-662
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 104

Conread position: 504-818
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 161, 151

Conread position: 542-746
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 599-818
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 628-844
Cow position:
Alignm length: 218
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 208, 203

Show alignments to all cow chromosomes.