Cow genome map

Conread name: Ss1.1-rpldo0111_g3.5

Conread position: 3-447
Cow position:
Alignm length: 467
Alignm identity: 305
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 8, 61

Conread position: 15-732
Cow position:
Alignm length: 739
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 224

Conread position: 15-817
Cow position:
Alignm length: 807
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 267

Conread position: 15-848
Cow position:
Alignm length: 855
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 15-848
Cow position:
Alignm length: 853
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 23-809
Cow position:
Alignm length: 802
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 57-707
Cow position:
Alignm length: 661
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 290

Conread position: 89-848
Cow position:
Alignm length: 767
Alignm identity: 441
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 9

Conread position: 142-791
Cow position:
Alignm length: 667
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 246

Conread position: 264-820
Cow position:
Alignm length: 560
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 273

Conread position: 284-818
Cow position:
Alignm length: 540
Alignm identity: 337
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 109, 5

Conread position: 285-848
Cow position:
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 286-744
Cow position:
Alignm length: 463
Alignm identity: 289
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 143, 126

Conread position: 286-777
Cow position:
Alignm length: 494
Alignm identity: 307
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 114

Conread position: 287-848
Cow position:
Alignm length: 562
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 287-848
Cow position:
Alignm length: 563
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 164

Conread position: 287-848
Cow position:
Alignm length: 562
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 288-668
Cow position:
Alignm length: 383
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 184

Conread position: 288-682
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 69

Conread position: 288-805
Cow position:
Alignm length: 518
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 288-805
Cow position:
Alignm length: 518
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 288-815
Cow position:
Alignm length: 528
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 288-816
Cow position:
Alignm length: 531
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 288-844
Cow position:
Alignm length: 558
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 538

Conread position: 288-848
Cow position:
Alignm length: 563
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 157

Conread position: 288-848
Cow position:
Alignm length: 563
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 102

Conread position: 289-704
Cow position:
Alignm length: 419
Alignm identity: 266
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 37

Conread position: 290-817
Cow position:
Alignm length: 528
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 292-743
Cow position:
Alignm length: 457
Alignm identity: 290
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 34

Conread position: 292-815
Cow position:
Alignm length: 524
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 292-818
Cow position:
Alignm length: 530
Alignm identity: 324
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 32

Conread position: 292-818
Cow position:
Alignm length: 535
Alignm identity: 334
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 34

Conread position: 310-803
Cow position:
Alignm length: 499
Alignm identity: 315
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 252, 54

Conread position: 311-809
Cow position:
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 313-844
Cow position:
Alignm length: 533
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 158

Conread position: 320-848
Cow position:
Alignm length: 532
Alignm identity: 309
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 462, 13

Conread position: 325-807
Cow position:
Alignm length: 488
Alignm identity: 306
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 68

Conread position: 333-734
Cow position:
Alignm length: 404
Alignm identity: 241
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 250, 245

Conread position: 335-848
Cow position:
Alignm length: 517
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 81

Conread position: 346-805
Cow position:
Alignm length: 462
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 107

Conread position: 350-767
Cow position:
Alignm length: 422
Alignm identity: 273
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 56

Conread position: 402-848
Cow position:
Alignm length: 450
Alignm identity: 268
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 245, 77

Conread position: 415-812
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 241, 38

Conread position: 436-818
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 198, 204

Conread position: 451-814
Cow position:
Alignm length: 365
Alignm identity: 222
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 186, 217

Conread position: 451-815
Cow position:
Alignm length: 368
Alignm identity: 225
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 122

Conread position: 459-812
Cow position:
Alignm length: 355
Alignm identity: 230
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 21, 77

Conread position: 516-848
Cow position:
Alignm length: 334
Alignm identity: 205
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 628-848
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 102

Show alignments to all cow chromosomes.