Cow genome map
| Conread name: | Ss1.1-rpldo0111_g3.5 |
| Conread position: | 7-731 |
| Cow position: | chr3:62742751-62743471 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 7-848 |
| Cow position: | chr3:68026816-68027672 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 8-431 |
| Cow position: | chr3:62722014-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 13-719 |
| Cow position: | chr3:68045664-68046383 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 678 |
| Conread position: | 13-785 |
| Cow position: | chr3:62722346-62721557 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 13-848 |
| Cow position: | chr3:62742342-62743168 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 312 |
| Conread position: | 62-839 |
| Cow position: | chr3:62722378-62721586 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 133-839 |
| Cow position: | chr3:68045535-68046256 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 373 |
| Conread position: | 141-848 |
| Cow position: | chr3:62722382-62721661 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 163-853 |
| Cow position: | chr3:62742659-62743341 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 197-848 |
| Cow position: | chr3:68027090-68027756 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 280-765 |
| Cow position: | chr3:77351061-77350586 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 280-809 |
| Cow position: | chr3:77351227-77350708 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 280-844 |
| Cow position: | chr3:62722313-62721749 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 285-758 |
| Cow position: | chr3:20194823-20195296 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 130, 125 |
| Conread position: | 288-848 |
| Cow position: | chr3:62742299-62742853 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 59 |
| Conread position: | 289-839 |
| Cow position: | chr3:68045790-68046340 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 290-777 |
| Cow position: | chr3:62742552-62743030 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 89 |
| Conread position: | 290-848 |
| Cow position: | chr3:62722387-62721829 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 290-851 |
| Cow position: | chr3:77351302-77350749 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 97 |
| Conread position: | 316-848 |
| Cow position: | chr3:62742242-62742769 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 333-836 |
| Cow position: | chr3:68045499-68046001 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 7 |
| Conread position: | 337-606 |
| Cow position: | chr3:16020471-16020209 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 344-844 |
| Cow position: | chr3:68045591-68046093 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 312 |
| Conread position: | 372-835 |
| Cow position: | chr3:62743033-62743491 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 593-848 |
| Cow position: | chr3:16020467-16020219 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 234, 52 |
| Conread position: | 602-848 |
| Cow position: | chr3:68045599-68045845 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.