Cow genome map


           Conread name:
           Ss1.1-rpldo0111_g3.5
        

               Conread position:
               7-731
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               7-848
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               8-431
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               13-719
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 678
               

               Conread position:
               13-785
               

               Cow position:
               
               

               Alignm length:
               792
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               13-848
               

               Cow position:
               
               

               Alignm length:
               852
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 312
               

               Conread position:
               62-839
               

               Cow position:
               
               

               Alignm length:
               795
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               133-839
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 373
               

               Conread position:
               141-848
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               163-853
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 82
               

               Conread position:
               197-848
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               280-765
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               280-809
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               339
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               280-844
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               285-758
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               130, 125
               

               Conread position:
               288-848
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 59
               

               Conread position:
               289-839
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 114
               

               Conread position:
               290-777
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 89
               

               Conread position:
               290-848
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               290-851
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               316-848
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               333-836
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 7
               

               Conread position:
               337-606
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               344-844
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 312
               

               Conread position:
               372-835
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               593-848
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               234, 52
               

               Conread position:
               602-848
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.