Cow genome map
| Conread name: | Ss1.1-rpldo0111_g3.5 |
| Conread position: | 1-779 |
| Cow position: | chr6:49396181-49396972 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 11-743 |
| Cow position: | chr6:49395940-49396684 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 11-848 |
| Cow position: | chr6:49340549-49341404 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 135 |
| Conread position: | 15-832 |
| Cow position: | chr6:49340638-49341470 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 15-848 |
| Cow position: | chr6:49340470-49341320 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 17-848 |
| Cow position: | chr6:49340388-49341236 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 203-848 |
| Cow position: | chr6:49340253-49340900 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 280-818 |
| Cow position: | chr6:49396305-49396843 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-737 |
| Cow position: | chr6:49428833-49429285 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 287-777 |
| Cow position: | chr6:49395730-49396220 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 178 |
| Conread position: | 289-776 |
| Cow position: | chr6:49428585-49429072 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 289-781 |
| Cow position: | chr6:49429005-49429497 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 198, 211 |
| Conread position: | 289-818 |
| Cow position: | chr6:49428669-49429198 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 291-777 |
| Cow position: | chr6:49396154-49396634 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 77 |
| Conread position: | 291-818 |
| Cow position: | chr6:49396070-49396591 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 292-710 |
| Cow position: | chr6:49396569-49396987 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-734 |
| Cow position: | chr6:49428420-49428862 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 292-818 |
| Cow position: | chr6:49428924-49429450 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 294-828 |
| Cow position: | chr6:49395905-49396433 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 342-744 |
| Cow position: | chr6:49428217-49428620 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 13, 58 |
Show alignments to all cow chromosomes.