Cow genome map
| Conread name: | Ss1.1-rpldo0111_g3.5 |
| Conread position: | 3-794 |
| Cow position: | chr8:55580956-55581769 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 4-848 |
| Cow position: | chr8:46816436-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 15-716 |
| Cow position: | chr8:48406976-48406258 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 15-773 |
| Cow position: | chr8:46816615-46817390 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 15-809 |
| Cow position: | chr8:46816111-46816922 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 15-811 |
| Cow position: | chr8:46816531-46817345 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 15-813 |
| Cow position: | chr8:45201168-45201983 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 15-839 |
| Cow position: | chr8:48407312-48406471 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 15-844 |
| Cow position: | chr8:48407396-48406550 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 15-848 |
| Cow position: | chr8:46816363-46817213 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 16-848 |
| Cow position: | chr8:45200917-45201766 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 16-848 |
| Cow position: | chr8:45201085-45201934 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 166 |
| Conread position: | 17-799 |
| Cow position: | chr8:45201338-45202129 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 24-795 |
| Cow position: | chr8:48407555-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 388 |
| Conread position: | 58-817 |
| Cow position: | chr8:46815899-46816678 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 142-815 |
| Cow position: | chr8:48407015-48406327 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 276 |
| Conread position: | 199-809 |
| Cow position: | chr8:55581074-55581699 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 385 |
| Conread position: | 279-815 |
| Cow position: | chr8:45200777-45201313 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 103 |
| Conread position: | 280-848 |
| Cow position: | chr8:46815886-46816457 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 280-848 |
| Cow position: | chr8:55580834-55581402 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 212 |
| Conread position: | 281-765 |
| Cow position: | chr8:6958067-6957586 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 284 |
| Conread position: | 285-809 |
| Cow position: | chr8:46815978-46816502 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 108 |
| Conread position: | 285-809 |
| Cow position: | chr8:55580923-55581447 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 288-820 |
| Cow position: | chr8:46815651-46816178 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 330 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 275, 134 |
| Conread position: | 288-839 |
| Cow position: | chr8:48407526-48406975 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 532, 539 |
| Conread position: | 288-839 |
| Cow position: | chr8:55581010-55581561 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 288-851 |
| Cow position: | chr8:46816065-46816628 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-844 |
| Cow position: | chr8:48407609-48407054 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-848 |
| Cow position: | chr8:55581095-55581654 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 531, 538 |
| Conread position: | 292-848 |
| Cow position: | chr8:48407438-48406882 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 522, 535 |
| Conread position: | 347-848 |
| Cow position: | chr8:48407635-48407134 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 133 |
| Conread position: | 351-848 |
| Cow position: | chr8:55580736-55581234 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 352-800 |
| Cow position: | chr8:48406706-48406258 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 390 |
| Conread position: | 372-817 |
| Cow position: | chr8:45200786-45201231 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 512-815 |
| Cow position: | chr8:48407638-48407335 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-827 |
| Cow position: | chr8:6958058-6957770 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 589-844 |
| Cow position: | chr8:48407645-48407390 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.