Cow genome map


           Conread name:
           Ss1.1-rpldo0111_g3.5
        

               Conread position:
               3-794
               

               Cow position:
               
               

               Alignm length:
               817
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               4-848
               

               Cow position:
               
               

               Alignm length:
               865
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               15-716
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               15-773
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               15-809
               

               Cow position:
               
               

               Alignm length:
               815
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               15-811
               

               Cow position:
               
               

               Alignm length:
               820
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               15-813
               

               Cow position:
               
               

               Alignm length:
               817
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               15-839
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               15-844
               

               Cow position:
               
               

               Alignm length:
               851
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               15-848
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               16-848
               

               Cow position:
               
               

               Alignm length:
               855
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               16-848
               

               Cow position:
               
               

               Alignm length:
               852
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 166
               

               Conread position:
               17-799
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               24-795
               

               Cow position:
               
               

               Alignm length:
               792
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 388
               

               Conread position:
               58-817
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               142-815
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 276
               

               Conread position:
               199-809
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 385
               

               Conread position:
               279-815
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 103
               

               Conread position:
               280-848
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               280-848
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 212
               

               Conread position:
               281-765
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 284
               

               Conread position:
               285-809
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               285-809
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-820
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               275, 134
               

               Conread position:
               288-839
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               532, 539
               

               Conread position:
               288-839
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-851
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-844
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-848
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               531, 538
               

               Conread position:
               292-848
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               522, 535
               

               Conread position:
               347-848
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 133
               

               Conread position:
               351-848
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               352-800
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               382, 390
               

               Conread position:
               372-817
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 87
               

               Conread position:
               512-815
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               542-827
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               269, 0
               

               Conread position:
               589-844
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.