Cow genome map


           Conread name:
           Ss1.1-rpldo0111_g3.5
        

               Conread position:
               4-729
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 146
               

               Conread position:
               6-848
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               9-848
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 174
               

               Conread position:
               13-848
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               15-625
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               15-713
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               15-781
               

               Cow position:
               
               

               Alignm length:
               789
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               15-848
               

               Cow position:
               
               

               Alignm length:
               854
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               15-848
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               15-848
               

               Cow position:
               
               

               Alignm length:
               856
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               17-797
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               25-844
               

               Cow position:
               
               

               Alignm length:
               839
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               104-809
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 68
               

               Conread position:
               185-719
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               286-848
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 110
               

               Conread position:
               287-814
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               289-814
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               290-809
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               313
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               291-790
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               292-725
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               310-848
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 84
               

               Conread position:
               330-726
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 86
               

               Conread position:
               349-803
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 380
               

               Conread position:
               362-848
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               366-747
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               374-848
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 77
               

               Conread position:
               415-764
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               426-809
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 52
               

               Conread position:
               510-848
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.