Cow genome map


           Conread name:
           Ss1.1-rpldo0136_n6.5
        

               Conread position:
               80-219
               

               Cow position:
               chr5:18990155-18990025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               274-391
               

               Cow position:
               chr5:18988793-18988676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               393-524
               

               Cow position:
               chr5:18986712-18986581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               523-653
               

               Cow position:
               chr5:18985485-18985355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1013-1187
               

               Cow position:
               chr5:18977671-18977497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1184-1555
               

               Cow position:
               chr5:18971648-18971247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 66
               
Show alignments to all cow chromosomes.