Cow genome map


           Conread name:
           Ss1.1-rpldo0139_d10.5
        

               Conread position:
               113-262
               

               Cow position:
               chr5:33459003-33458854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-262
               

               Cow position:
               chr5:33462083-33461937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               262-441
               

               Cow position:
               chr5:33458656-33458477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-441
               

               Cow position:
               chr5:33461706-33461546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-514
               

               Cow position:
               chr5:33458391-33458313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               546-680
               

               Cow position:
               chr5:33457203-33457071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               749-876
               

               Cow position:
               chr5:33458081-33457956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               123
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.