Cow genome map
| Conread name: | Ss1.1-rpldo0139_p24.5 |
| Conread position: | 311-837 |
| Cow position: | chr13:39984232-39984758 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 373 |
| Conread position: | 313-638 |
| Cow position: | chr13:56292116-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 263, 0 |
| Conread position: | 313-690 |
| Cow position: | chr13:56333966-56334350 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 206 |
| Conread position: | 313-746 |
| Cow position: | chr13:56317950-56318388 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 313-806 |
| Cow position: | chr13:56292699-56292200 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 299 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 138, 190 |
| Conread position: | 313-814 |
| Cow position: | chr13:39984402-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 126 |
| Conread position: | 313-834 |
| Cow position: | chr13:39983982-39984503 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-835 |
| Cow position: | chr13:56333714-56334245 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 0 |
| Conread position: | 313-838 |
| Cow position: | chr13:39984150-39984675 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-695 |
| Cow position: | chr13:22124928-22125309 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 153, 173 |
| Conread position: | 314-695 |
| Cow position: | chr13:24162654-24163035 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 315-834 |
| Cow position: | chr13:39983816-39984335 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 317 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-738 |
| Cow position: | chr13:56292194-56291772 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 39 |
| Conread position: | 317-835 |
| Cow position: | chr13:39983902-39984420 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-837 |
| Cow position: | chr13:56292852-56292343 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 128, 84 |
| Conread position: | 327-798 |
| Cow position: | chr13:56317359-56317822 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 327-835 |
| Cow position: | chr13:56292433-56291930 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 322 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 328-703 |
| Cow position: | chr13:22124858-22125232 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 217, 208 |
| Conread position: | 338-821 |
| Cow position: | chr13:56333571-56334054 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 197 |
| Conread position: | 338-823 |
| Cow position: | chr13:29183798-29183318 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 224, 103 |
| Conread position: | 338-838 |
| Cow position: | chr13:39984091-39984591 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 437 |
| Conread position: | 338-838 |
| Cow position: | chr13:39984343-39984843 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 355-748 |
| Cow position: | chr13:56317908-56318305 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 180, 157 |
| Conread position: | 368-703 |
| Cow position: | chr13:24162624-24162958 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 177, 168 |
| Conread position: | 369-840 |
| Cow position: | chr13:56292301-56291840 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 103 |
| Conread position: | 377-836 |
| Cow position: | chr13:56333694-56334162 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 229 |
| Conread position: | 386-831 |
| Cow position: | chr13:56317860-56318306 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 154, 53 |
| Conread position: | 395-835 |
| Cow position: | chr13:39983812-39984252 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-825 |
| Cow position: | chr13:56292193-56291771 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 35 |
| Conread position: | 431-835 |
| Cow position: | chr13:56317295-56317691 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 461-837 |
| Cow position: | chr13:56333610-56333986 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 506-840 |
| Cow position: | chr13:56292332-56292009 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 196, 134 |
| Conread position: | 525-840 |
| Cow position: | chr13:56333506-56333821 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 83 |
| Conread position: | 547-840 |
| Cow position: | chr13:56292879-56292592 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 629-838 |
| Cow position: | chr13:56317930-56318139 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 133, 141 |
Show alignments to all cow chromosomes.