Cow genome map


           Conread name:
           Ss1.1-rpldo0139_p24.5
        

               Conread position:
               311-837
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 373
               

               Conread position:
               313-638
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               263, 0
               

               Conread position:
               313-690
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 206
               

               Conread position:
               313-746
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               313-806
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               299
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               138, 190
               

               Conread position:
               313-814
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 126
               

               Conread position:
               313-834
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-835
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 0
               

               Conread position:
               313-838
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-695
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               153, 173
               

               Conread position:
               314-695
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               169, 162
               

               Conread position:
               315-834
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               317
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-738
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 39
               

               Conread position:
               317-835
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-837
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               327-798
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               327-835
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               328-703
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               217, 208
               

               Conread position:
               338-821
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 197
               

               Conread position:
               338-823
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               224, 103
               

               Conread position:
               338-838
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               445, 437
               

               Conread position:
               338-838
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               355-748
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               180, 157
               

               Conread position:
               368-703
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               177, 168
               

               Conread position:
               369-840
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 103
               

               Conread position:
               377-836
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 229
               

               Conread position:
               386-831
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               154, 53
               

               Conread position:
               395-835
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               401-825
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 35
               

               Conread position:
               431-835
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               461-837
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               506-840
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               196, 134
               

               Conread position:
               525-840
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               547-840
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               629-838
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               133, 141
               
Show alignments to all cow chromosomes.