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Cow genome map

           
Conread name:
           
Ss1.1-rpldo0139_p24.5
        

               
Conread position:
               
194-840
               

               
Cow position:
               
chr18:1417627-1418279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
245-840
               

               
Cow position:
               
chr18:14453500-14452927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
285-831
               

               
Cow position:
               
chr18:51789163-51788618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 409
               

               
Conread position:
               
290-837
               

               
Cow position:
               
chr18:43175631-43175082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
306-772
               

               
Cow position:
               
chr18:51367684-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
306-840
               

               
Cow position:
               
chr18:42837941-42837407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 476
               

               
Conread position:
               
307-479
               

               
Cow position:
               
chr18:42743965-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
307-580
               

               
Cow position:
               
chr18:43053463-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
307-834
               

               
Cow position:
               
chr18:42675325-42674798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 386
               

               
Conread position:
               
307-834
               

               
Cow position:
               
chr18:50848499-50849026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 388
               

               
Conread position:
               
307-835
               

               
Cow position:
               
chr18:51789645-51789117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 230
               

               
Conread position:
               
307-836
               

               
Cow position:
               
chr18:51838622-51838104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
307-840
               

               
Cow position:
               
chr18:42960465-42959938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 98
               

               
Conread position:
               
307-840
               

               
Cow position:
               
chr18:51789813-51789280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 138
               

               
Conread position:
               
307-840
               

               
Cow position:
               
chr18:51812804-51812271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 307
               

               
Conread position:
               
307-840
               

               
Cow position:
               
chr18:51812972-51812439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 479
               

               
Conread position:
               
308-821
               

               
Cow position:
               
chr18:50245738-50246251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
308-834
               

               
Cow position:
               
chr18:50022495-50021961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 394
               

               
Conread position:
               
308-834
               

               
Cow position:
               
chr18:50049230-50048700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
308-834
               

               
Cow position:
               
chr18:50271458-50271984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
308-836
               

               
Cow position:
               
chr18:50049058-50048530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
308-838
               

               
Cow position:
               
chr18:40324887-40324357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 277
               

               
Conread position:
               
308-840
               

               
Cow position:
               
chr18:50098972-50099504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
310-828
               

               
Cow position:
               
chr18:56330188-56329670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 298
               

               
Conread position:
               
310-840
               

               
Cow position:
               
chr18:51839561-51839032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr18:51969834-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 145
               

               
Conread position:
               
311-659
               

               
Cow position:
               
chr18:50021725-50021377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
144, 128
               

               
Conread position:
               
311-676
               

               
Cow position:
               
chr18:44153628-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
213, 5
               

               
Conread position:
               
311-840
               

               
Cow position:
               
chr18:42960131-42959611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 222
               

               
Conread position:
               
312-736
               

               
Cow position:
               
chr18:50058782-50058361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
217, 226
               

               
Conread position:
               
312-834
               

               
Cow position:
               
chr18:54993157-54993679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
312-835
               

               
Cow position:
               
chr18:51765744-51765222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 5
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:40324547-40324019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 213
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:42744716-42744188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 221
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:43093993-43093477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:43167793-43168321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 385
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:50251003-50251528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:51367929-51367402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
312-840
               

               
Cow position:
               
chr18:51368349-51367821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 225
               

               
Conread position:
               
313-479
               

               
Cow position:
               
chr18:42984634-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-558
               

               
Cow position:
               
chr18:51873786-51874032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
227, 0
               

               
Conread position:
               
313-568
               

               
Cow position:
               
chr18:51765156-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-572
               

               
Cow position:
               
chr18:41198501-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-572
               

               
Cow position:
               
chr18:42792646-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-607
               

               
Cow position:
               
chr18:51969761-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
313-609
               

               
Cow position:
               
chr18:42674647-42674355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
251, 0
               

               
Conread position:
               
313-611
               

               
Cow position:
               
chr18:42827658-42827961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
313-642
               

               
Cow position:
               
chr18:22634894-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
212, 224
               

               
Conread position:
               
313-644
               

               
Cow position:
               
chr18:43168214-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
210, 224
               

               
Conread position:
               
313-647
               

               
Cow position:
               
chr18:44240515-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-648
               

               
Cow position:
               
chr18:56329177-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-651
               

               
Cow position:
               
chr18:42744127-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 296
               

               
Conread position:
               
313-652
               

               
Cow position:
               
chr18:44397849-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-654
               

               
Cow position:
               
chr18:40075361-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 222
               

               
Conread position:
               
313-655
               

               
Cow position:
               
chr18:50295526-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
207, 216
               

               
Conread position:
               
313-669
               

               
Cow position:
               
chr18:51970425-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
313-672
               

               
Cow position:
               
chr18:14453118-14452758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
210, 219
               

               
Conread position:
               
313-678
               

               
Cow position:
               
chr18:49021737-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 224
               

               
Conread position:
               
313-687
               

               
Cow position:
               
chr18:50083872-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
206, 216
               

               
Conread position:
               
313-693
               

               
Cow position:
               
chr18:14453682-14453308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
313, 307
               

               
Conread position:
               
313-693
               

               
Cow position:
               
chr18:51367593-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 294
               

               
Conread position:
               
313-694
               

               
Cow position:
               
chr18:51874310-51874691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-695
               

               
Cow position:
               
chr18:42693626-42693244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
232, 228
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr18:50246499-50246878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
313-727
               

               
Cow position:
               
chr18:44397933-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 308
               

               
Conread position:
               
313-737
               

               
Cow position:
               
chr18:50246415-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
313-743
               

               
Cow position:
               
chr18:55018470-55018899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 56
               

               
Conread position:
               
313-744
               

               
Cow position:
               
chr18:54993662-54994090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
316, 254
               

               
Conread position:
               
313-759
               

               
Cow position:
               
chr18:50048633-50048193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 141
               

               
Conread position:
               
313-760
               

               
Cow position:
               
chr18:51751913-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 217
               

               
Conread position:
               
313-761
               

               
Cow position:
               
chr18:51839307-51838859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 383
               

               
Conread position:
               
313-770
               

               
Cow position:
               
chr18:56128879-56129334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 221
               

               
Conread position:
               
313-773
               

               
Cow position:
               
chr18:33092768-33092314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
272, 277
               

               
Conread position:
               
313-774
               

               
Cow position:
               
chr18:51812378-51811917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 384
               

               
Conread position:
               
313-775
               

               
Cow position:
               
chr18:50849009-50849471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 221
               

               
Conread position:
               
313-779
               

               
Cow position:
               
chr18:53635286-53634822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 253
               

               
Conread position:
               
313-809
               

               
Cow position:
               
chr18:50099901-50100394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
313-815
               

               
Cow position:
               
chr18:55008897-55009398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
313-817
               

               
Cow position:
               
chr18:42674899-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 141
               

               
Conread position:
               
313-818
               

               
Cow position:
               
chr18:40306843-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-823
               

               
Cow position:
               
chr18:41198249-41198759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-826
               

               
Cow position:
               
chr18:40324462-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-826
               

               
Cow position:
               
chr18:53610045-53609528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
211, 224
               

               
Conread position:
               
313-827
               

               
Cow position:
               
chr18:50099313-50099826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
313-827
               

               
Cow position:
               
chr18:55523646-55524159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
313-828
               

               
Cow position:
               
chr18:42791806-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
313-828
               

               
Cow position:
               
chr18:50059285-50058770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 306
               

               
Conread position:
               
313-828
               

               
Cow position:
               
chr18:50099229-50099744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
313-828
               

               
Cow position:
               
chr18:56316219-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 224
               

               
Conread position:
               
313-829
               

               
Cow position:
               
chr18:42791974-42792490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 384
               

               
Conread position:
               
313-829
               

               
Cow position:
               
chr18:50099649-50100165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
313-829
               

               
Cow position:
               
chr18:50295274-50295790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 214
               

               
Conread position:
               
313-829
               

               
Cow position:
               
chr18:56247989-56247466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 94
               

               
Conread position:
               
313-830
               

               
Cow position:
               
chr18:42791470-42791987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 384
               

               
Conread position:
               
313-830
               

               
Cow position:
               
chr18:43093248-43092733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
313-832
               

               
Cow position:
               
chr18:51789219-51788701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 225
               

               
Conread position:
               
313-832
               

               
Cow position:
               
chr18:54979646-54980164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
313-833
               

               
Cow position:
               
chr18:51752081-51751560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 379
               

               
Conread position:
               
313-833
               

               
Cow position:
               
chr18:52447866-52448387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 0
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:40306423-40306944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 222
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:40324630-40324109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:40324714-40324193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:42791638-42792159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 221
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:49032960-49032439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 202
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50022062-50021538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50058949-50058430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50059033-50058512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50059369-50058848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 224
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50059537-50059016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 384
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50083452-50083973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 209
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50099481-50100002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50099565-50100086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:50848757-50849278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 224
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:51751661-51751146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:51839055-51838516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 400
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:53509324-53509845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:53525778-53526299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:53635790-53635269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 387
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:54979730-54980251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 150
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:54992738-54993259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:55018050-55018571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr18:56316051-56316572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:40306759-40307281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 218
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:40324798-40324276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:42792058-42792580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 224
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:42792310-42792832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:44398353-44397831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:50848591-50849111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:51789471-51788949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:51812714-51812192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 228
               

               
Conread position:
               
313-835
               

               
Cow position:
               
chr18:51969343-51969854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 254
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:41197577-41198100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 384
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:41197829-41198352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:42790882-42791405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 221
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:42791134-42791657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 222
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:42791218-42791741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 225
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:44398269-44397746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:50099145-50099668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:51367761-51367238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 383
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:51752165-51751642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:51765660-51765137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 224
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:52427551-52428074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 194
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:52432900-52433423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 194
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:52447446-52447969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 382
               

               
Conread position:
               
313-836
               

               
Cow position:
               
chr18:52447614-52448137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 384
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:14453934-14453410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 399
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:43093584-43093060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 224
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:44398185-44397661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:50271631-50272154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 378
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:55523394-55523918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 218
               

               
Conread position:
               
313-837
               

               
Cow position:
               
chr18:56247727-56247211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
313-838
               

               
Cow position:
               
chr18:49032456-49031934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 223
               

               
Conread position:
               
313-838
               

               
Cow position:
               
chr18:49033128-49032603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-838
               

               
Cow position:
               
chr18:51400702-51401227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 56
               

               
Conread position:
               
313-838
               

               
Cow position:
               
chr18:51812882-51812357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-838
               

               
Cow position:
               
chr18:51969511-51970025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 103
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:33064600-33064073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 307
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:40306675-40307202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 298
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:41197745-41198272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 203
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42674983-42674456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 188
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42675067-42674540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 303
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42791050-42791577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42791890-42792417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42985138-42984611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 218
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42985222-42984695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 202
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:42985558-42985031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 216
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:43093416-43092889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 387
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:43094157-43093645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 47
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:43167626-43168153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:44184884-44184357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 132
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:44398101-44397574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 383
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:49032876-49032349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:49033296-49032769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 228
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:50048885-50048358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:50059453-50058926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 149
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:50083704-50084231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 232
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:50099397-50099924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:50245995-50246522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51368264-51367738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 221
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51368432-51367905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 316
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51400534-51401061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 224
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51400618-51401145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51765828-51765301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 307
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51765912-51765385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 384
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51789303-51788776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 132
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51789387-51788860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 224
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51789555-51789028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51789723-51789196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
485, 473
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51812462-51811935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 384
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51812546-51812019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51812630-51812103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 224
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51838784-51838262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
378, 198
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:51839475-51838948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:52447530-52448057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:52447698-52448225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 383
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:52447782-52448310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 295
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:53635958-53635431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:56247643-56247126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
313-840
               

               
Cow position:
               
chr18:56248073-56247536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 171
               

               
Conread position:
               
314-571
               

               
Cow position:
               
chr18:42744042-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-575
               

               
Cow position:
               
chr18:44184211-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 189
               

               
Conread position:
               
314-658
               

               
Cow position:
               
chr18:43174765-43174430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
108, 104
               

               
Conread position:
               
314-676
               

               
Cow position:
               
chr18:51400787-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-684
               

               
Cow position:
               
chr18:43048641-43048272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 321
               

               
Conread position:
               
314-687
               

               
Cow position:
               
chr18:50251170-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
314-689
               

               
Cow position:
               
chr18:43048725-43048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 197
               

               
Conread position:
               
314-690
               

               
Cow position:
               
chr18:51838449-51838081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
303, 40
               

               
Conread position:
               
314-690
               

               
Cow position:
               
chr18:56316472-56316848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-732
               

               
Cow position:
               
chr18:56329260-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-737
               

               
Cow position:
               
chr18:43022396-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 381
               

               
Conread position:
               
314-737
               

               
Cow position:
               
chr18:43168131-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 128
               

               
Conread position:
               
314-743
               

               
Cow position:
               
chr18:55523897-55524328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr18:51838970-51838505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 379
               

               
Conread position:
               
314-762
               

               
Cow position:
               
chr18:44154112-44153671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
314-770
               

               
Cow position:
               
chr18:43119900-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 197
               

               
Conread position:
               
314-771
               

               
Cow position:
               
chr18:50083789-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
314-773
               

               
Cow position:
               
chr18:40086093-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
314-788
               

               
Cow position:
               
chr18:44253804-44253331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 380
               

               
Conread position:
               
314-789
               

               
Cow position:
               
chr18:42959876-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
314-810
               

               
Cow position:
               
chr18:43168047-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-814
               

               
Cow position:
               
chr18:49032539-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 205
               

               
Conread position:
               
314-815
               

               
Cow position:
               
chr18:41948757-41948258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 0
               

               
Conread position:
               
314-815
               

               
Cow position:
               
chr18:42744294-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-815
               

               
Cow position:
               
chr18:42984969-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 383
               

               
Conread position:
               
314-815
               

               
Cow position:
               
chr18:43022480-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 383
               

               
Conread position:
               
314-815
               

               
Cow position:
               
chr18:44240348-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 392
               

               
Conread position:
               
314-817
               

               
Cow position:
               
chr18:42837597-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 211
               

               
Conread position:
               
314-819
               

               
Cow position:
               
chr18:50246332-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
314-820
               

               
Cow position:
               
chr18:44398016-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 294
               

               
Conread position:
               
314-821
               

               
Cow position:
               
chr18:44184463-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 201
               

               
Conread position:
               
314-823
               

               
Cow position:
               
chr18:42792395-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
314-826
               

               
Cow position:
               
chr18:53635369-53634859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 0
               

               
Conread position:
               
314-826
               

               
Cow position:
               
chr18:56128796-56129306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 336
               

               
Conread position:
               
314-827
               

               
Cow position:
               
chr18:1418089-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
314-827
               

               
Cow position:
               
chr18:41948841-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-828
               

               
Cow position:
               
chr18:33064095-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 224
               

               
Conread position:
               
314-829
               

               
Cow position:
               
chr18:50848842-50849357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 218
               

               
Conread position:
               
314-829
               

               
Cow position:
               
chr18:56329932-56329417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:42792143-42792663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 224
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:44184547-44184027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 400
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:50250922-50251436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:52428476-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 397
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:52433657-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 397
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:53610380-53609860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
208, 223
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:53635705-53635185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:56128376-56128896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
394, 384
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:56128460-56128980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-834
               

               
Cow position:
               
chr18:56329428-56328908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 392
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:33064263-33063742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 225
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:42744546-42744025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 379
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:42791387-42791908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:43167879-43168400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 381
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:43175017-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 356
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:43175185-43174664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 294
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:44184715-44184194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-835
               

               
Cow position:
               
chr18:49022733-49023254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:33093019-33092497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:42985389-42984867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:51874066-51874581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 93
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52012356-52011834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52427804-52428326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 293
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52427972-52428494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 392
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52428056-52428578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52428140-52428662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 293
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52428308-52428830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52433153-52433675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52433237-52433759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52433321-52433843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 377
               

               
Conread position:
               
314-836
               

               
Cow position:
               
chr18:52433489-52434011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:33064179-33063656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:40086177-40085661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 166
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:41197914-41198437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:41198082-41198605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 223
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:42675234-42674711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 295
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:42675486-42674963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:42960296-42959773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 378
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:43120152-43119629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 386
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:43120236-43119713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 201
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:44253468-44252959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 99
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:49032707-49032184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 189
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:49033043-49032520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:51367843-51367321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 46
               

               
Conread position:
               
314-837
               

               
Cow position:
               
chr18:56316304-56316827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 113
               

               
Conread position:
               
314-838
               

               
Cow position:
               
chr18:44184631-44184107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-838
               

               
Cow position:
               
chr18:50848674-50849198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 145
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:14453285-14452758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 187
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:33064347-33063821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:33064767-33064241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 378
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:40086259-40085743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 58
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:40086601-40086071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 384
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:41197662-41198188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:41197998-41198524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:41198166-41198692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:41949177-41948651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 468
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:41949345-41948819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 470
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42744378-42743852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 221
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42744630-42744104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42837681-42837155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 295
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42837849-42837323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 381
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42960044-42959527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 289
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42960212-42959695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 382
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42985053-42984527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 211
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:42985473-42984947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 376
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022564-43022038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022648-43022122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 218
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022732-43022206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 380
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022816-43022290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 223
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022900-43022374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 299
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43022984-43022458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 380
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43023068-43022542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43175101-43174575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 440
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:43175437-43174911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44153867-44153353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 197
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44154196-44153677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 218
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44154451-44153923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 474
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44184799-44184273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44239844-44240370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44239928-44240454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44240012-44240538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 202
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44240096-44240622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 380
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44240180-44240706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 211
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44240264-44240790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 218
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44253552-44253040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:44253968-44253446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:49032791-49032265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:50246164-50246690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:52427888-52428414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:52428224-52428750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 377
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:52428392-52428918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:52433405-52433931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 377
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:52433573-52434099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:53610296-53609770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
216, 221
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:53635873-53635347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
214, 223
               

               
Conread position:
               
314-840
               

               
Cow position:
               
chr18:56329764-56329238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr18:42837344-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
204, 222
               

               
Conread position:
               
315-656
               

               
Cow position:
               
chr18:44184294-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
315-772
               

               
Cow position:
               
chr18:51765406-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-819
               

               
Cow position:
               
chr18:56433388-56433888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
315-834
               

               
Cow position:
               
chr18:40306593-40307112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-834
               

               
Cow position:
               
chr18:49033378-49032859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-835
               

               
Cow position:
               
chr18:44253887-44253368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 222
               

               
Conread position:
               
315-835
               

               
Cow position:
               
chr18:51752247-51751727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
315-836
               

               
Cow position:
               
chr18:43175352-43174831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-836
               

               
Cow position:
               
chr18:52432986-52433507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-837
               

               
Cow position:
               
chr18:43119983-43119461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 126
               

               
Conread position:
               
315-837
               

               
Cow position:
               
chr18:51751995-51751477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 293
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:42744461-42743936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 294
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:43093498-43092973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 393
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:43120319-43119794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 448
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:43120403-43119878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 399
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:43175268-43174743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 215
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:44398435-44397910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:52427637-52428162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 376
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:52447196-52447721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
315-840
               

               
Cow position:
               
chr18:52447364-52447889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 467
               

               
Conread position:
               
316-609
               

               
Cow position:
               
chr18:51839136-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
316-834
               

               
Cow position:
               
chr18:42790969-42791487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 137
               

               
Conread position:
               
316-835
               

               
Cow position:
               
chr18:42791557-42792076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 268
               

               
Conread position:
               
316-836
               

               
Cow position:
               
chr18:52427722-52428242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
316-837
               

               
Cow position:
               
chr18:43120477-43119965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
316-840
               

               
Cow position:
               
chr18:52433071-52433595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
317-840
               

               
Cow position:
               
chr18:51368597-51368073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
318-837
               

               
Cow position:
               
chr18:51765991-51765472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
319-763
               

               
Cow position:
               
chr18:56265041-56264603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
319-834
               

               
Cow position:
               
chr18:54967633-54968141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
204, 7
               

               
Conread position:
               
320-834
               

               
Cow position:
               
chr18:54966876-54967390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
138, 122
               

               
Conread position:
               
320-836
               

               
Cow position:
               
chr18:55008568-55009084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
321-732
               

               
Cow position:
               
chr18:56267534-56267122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
322-772
               

               
Cow position:
               
chr18:56434224-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 123
               

               
Conread position:
               
322-834
               

               
Cow position:
               
chr18:50848346-50848858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 375
               

               
Conread position:
               
322-836
               

               
Cow position:
               
chr18:53497983-53498498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
215, 42
               

               
Conread position:
               
323-736
               

               
Cow position:
               
chr18:53498572-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 214
               

               
Conread position:
               
323-832
               

               
Cow position:
               
chr18:54993000-54993508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
323-840
               

               
Cow position:
               
chr18:53610539-53610022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
199, 210
               

               
Conread position:
               
324-695
               

               
Cow position:
               
chr18:50849106-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
355, 9
               

               
Conread position:
               
324-834
               

               
Cow position:
               
chr18:22634575-22635079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
214, 45
               

               
Conread position:
               
325-591
               

               
Cow position:
               
chr18:53586145-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
325-647
               

               
Cow position:
               
chr18:54968220-54968542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
325-680
               

               
Cow position:
               
chr18:52448046-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
325-681
               

               
Cow position:
               
chr18:22634822-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
325-769
               

               
Cow position:
               
chr18:56494110-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 0
               

               
Conread position:
               
325-818
               

               
Cow position:
               
chr18:55066844-55066351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-819
               

               
Cow position:
               
chr18:22634654-22635148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
215, 204
               

               
Conread position:
               
325-822
               

               
Cow position:
               
chr18:49022494-49022989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
325-827
               

               
Cow position:
               
chr18:53560192-53560693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 210
               

               
Conread position:
               
325-828
               

               
Cow position:
               
chr18:50848433-50848936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
325-831
               

               
Cow position:
               
chr18:54967802-54968306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 212
               

               
Conread position:
               
325-834
               

               
Cow position:
               
chr18:53560108-53560617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 210
               

               
Conread position:
               
325-834
               

               
Cow position:
               
chr18:53586817-53586308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 212
               

               
Conread position:
               
325-834
               

               
Cow position:
               
chr18:54979994-54980503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 213
               

               
Conread position:
               
325-835
               

               
Cow position:
               
chr18:42724574-42724064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
325-835
               

               
Cow position:
               
chr18:56493942-56494452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
325-836
               

               
Cow position:
               
chr18:50848181-50848692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 129
               

               
Conread position:
               
325-836
               

               
Cow position:
               
chr18:55523826-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
325-837
               

               
Cow position:
               
chr18:41197505-41198017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 212
               

               
Conread position:
               
325-837
               

               
Cow position:
               
chr18:54992918-54993430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 210
               

               
Conread position:
               
325-840
               

               
Cow position:
               
chr18:40306183-40306698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 207
               

               
Conread position:
               
325-840
               

               
Cow position:
               
chr18:55523742-55524257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 198
               

               
Conread position:
               
326-737
               

               
Cow position:
               
chr18:55066759-55066348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 212
               

               
Conread position:
               
326-815
               

               
Cow position:
               
chr18:55067095-55066606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
326-828
               

               
Cow position:
               
chr18:55497691-55497189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
196, 208
               

               
Conread position:
               
326-830
               

               
Cow position:
               
chr18:49021501-49022000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
326-835
               

               
Cow position:
               
chr18:55523323-55523830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
326-836
               

               
Cow position:
               
chr18:51368503-51367993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 372
               

               
Conread position:
               
326-836
               

               
Cow position:
               
chr18:53498236-53498749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
326-837
               

               
Cow position:
               
chr18:51839378-51838867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 216
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:40074873-40075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:50021965-50021448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:51400379-51400893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 296
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:51766067-51765553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 304
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:51789878-51789364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:51813037-51812523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 211
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:52446955-52447469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 404
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:53509253-53509767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:53636113-53635599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:56128052-56128566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:56128304-56128818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
203, 211
               

               
Conread position:
               
326-840
               

               
Cow position:
               
chr18:56330004-56329490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 214
               

               
Conread position:
               
327-606
               

               
Cow position:
               
chr18:53526212-53526489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
224, 0
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr18:55523996-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
327-737
               

               
Cow position:
               
chr18:42674801-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 114
               

               
Conread position:
               
327-738
               

               
Cow position:
               
chr18:40075291-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
327-744
               

               
Cow position:
               
chr18:52011923-52011503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 206
               

               
Conread position:
               
327-771
               

               
Cow position:
               
chr18:52012175-52011731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
327-789
               

               
Cow position:
               
chr18:55497606-55497144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
200, 211
               

               
Conread position:
               
327-813
               

               
Cow position:
               
chr18:56494028-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 208
               

               
Conread position:
               
327-816
               

               
Cow position:
               
chr18:56329331-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 210
               

               
Conread position:
               
327-818
               

               
Cow position:
               
chr18:54967135-54967626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
327-819
               

               
Cow position:
               
chr18:53560278-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 208
               

               
Conread position:
               
327-819
               

               
Cow position:
               
chr18:55067010-55066518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 210
               

               
Conread position:
               
327-822
               

               
Cow position:
               
chr18:53509506-53509999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
327-822
               

               
Cow position:
               
chr18:53525960-53526453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
327-823
               

               
Cow position:
               
chr18:50281858-50282354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
375, 370
               

               
Conread position:
               
327-823
               

               
Cow position:
               
chr18:55018400-55018895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 371
               

               
Conread position:
               
327-829
               

               
Cow position:
               
chr18:53498327-53498826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 134
               

               
Conread position:
               
327-832
               

               
Cow position:
               
chr18:51874158-51874660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 43
               

               
Conread position:
               
327-832
               

               
Cow position:
               
chr18:54992836-54993340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 364
               

               
Conread position:
               
327-833
               

               
Cow position:
               
chr18:54968054-54968561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:42791316-42791823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 462
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53509422-53509929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53559774-53560281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53559942-53560449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53560026-53560533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 448
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53586479-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 370
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53586647-53586140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:53635608-53635101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:54979828-54980335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:54979912-54980419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 210
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:54993256-54993763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 210
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:54993424-54993929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 199
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:55018148-55018655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 213
               

               
Conread position:
               
327-834
               

               
Cow position:
               
chr18:56128557-56129064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
327-835
               

               
Cow position:
               
chr18:56248143-56247625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 197
               

               
Conread position:
               
327-836
               

               
Cow position:
               
chr18:33064418-33063909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 210
               

               
Conread position:
               
327-836
               

               
Cow position:
               
chr18:41948912-41948403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 367
               

               
Conread position:
               
327-836
               

               
Cow position:
               
chr18:53525876-53526385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
327-836
               

               
Cow position:
               
chr18:53586731-53586222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 208
               

               
Conread position:
               
327-837
               

               
Cow position:
               
chr18:54967219-54967726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 134
               

               
Conread position:
               
327-837
               

               
Cow position:
               
chr18:56329667-56329157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
327-838
               

               
Cow position:
               
chr18:53635524-53635014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 299
               

               
Conread position:
               
327-838
               

               
Cow position:
               
chr18:56128641-56129151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
303, 288
               

               
Conread position:
               
327-839
               

               
Cow position:
               
chr18:40074955-40075467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 158
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:33064670-33064157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:33064922-33064409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 303
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:33065090-33064577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:43175667-43175163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:49022328-49022839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
368, 261
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:52012259-52011746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 210
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:54980080-54980591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 201
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:55066926-55066413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:55523576-55524089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 274
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:56329583-56329070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
327-840
               

               
Cow position:
               
chr18:56493860-56494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
328-740
               

               
Cow position:
               
chr18:41198348-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 188
               

               
Conread position:
               
328-769
               

               
Cow position:
               
chr18:53610114-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
406, 0
               

               
Conread position:
               
328-822
               

               
Cow position:
               
chr18:42693863-42693369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
328-823
               

               
Cow position:
               
chr18:50295373-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
328-827
               

               
Cow position:
               
chr18:55008660-55009158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
328-828
               

               
Cow position:
               
chr18:56329498-56328998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
328-829
               

               
Cow position:
               
chr18:50246262-50246763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
328-829
               

               
Cow position:
               
chr18:53587066-53586565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
328-832
               

               
Cow position:
               
chr18:50848940-50849444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 250
               

               
Conread position:
               
328-832
               

               
Cow position:
               
chr18:56434398-56434901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
113, 121
               

               
Conread position:
               
328-834
               

               
Cow position:
               
chr18:50281691-50282197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
368, 378
               

               
Conread position:
               
328-834
               

               
Cow position:
               
chr18:54993089-54993595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 363
               

               
Conread position:
               
328-836
               

               
Cow position:
               
chr18:56329834-56329326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
328-838
               

               
Cow position:
               
chr18:49032609-49032099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
328-840
               

               
Cow position:
               
chr18:40075124-40075636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 209
               

               
Conread position:
               
328-840
               

               
Cow position:
               
chr18:40306522-40307034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 447
               

               
Conread position:
               
328-840
               

               
Cow position:
               
chr18:43120054-43119542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
328-840
               

               
Cow position:
               
chr18:53559691-53560203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
329-693
               

               
Cow position:
               
chr18:51839207-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
329-701
               

               
Cow position:
               
chr18:40085998-40085629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
329-756
               

               
Cow position:
               
chr18:56247463-56247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
329-771
               

               
Cow position:
               
chr18:50048785-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
329-789
               

               
Cow position:
               
chr18:42693694-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
200, 208
               

               
Conread position:
               
329-811
               

               
Cow position:
               
chr18:22634742-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
329-813
               

               
Cow position:
               
chr18:55523494-55523978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-816
               

               
Cow position:
               
chr18:53586981-53586494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 206
               

               
Conread position:
               
329-819
               

               
Cow position:
               
chr18:54967890-54968378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
329-819
               

               
Cow position:
               
chr18:55018318-55018809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
329-822
               

               
Cow position:
               
chr18:40075209-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 194
               

               
Conread position:
               
329-827
               

               
Cow position:
               
chr18:14454002-14453505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 205
               

               
Conread position:
               
329-827
               

               
Cow position:
               
chr18:53636026-53635528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-827
               

               
Cow position:
               
chr18:56128139-56128637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 215
               

               
Conread position:
               
329-830
               

               
Cow position:
               
chr18:42827422-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 366
               

               
Conread position:
               
329-832
               

               
Cow position:
               
chr18:50099833-50100335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:1417936-1418441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:40306271-40306776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 362
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:42791738-42792243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 211
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:50022133-50021622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:50083384-50083889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:53610449-53609944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
379, 369
               

               
Conread position:
               
329-834
               

               
Cow position:
               
chr18:56434072-56434568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
329-835
               

               
Cow position:
               
chr18:42694030-42693526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
216, 212
               

               
Conread position:
               
329-835
               

               
Cow position:
               
chr18:42959945-42959448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 125
               

               
Conread position:
               
329-835
               

               
Cow position:
               
chr18:56433818-56434317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
329-836
               

               
Cow position:
               
chr18:41948994-41948487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-836
               

               
Cow position:
               
chr18:50083552-50084059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 212
               

               
Conread position:
               
329-836
               

               
Cow position:
               
chr18:56434147-56434654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
329-837
               

               
Cow position:
               
chr18:43093652-43093144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
329-837
               

               
Cow position:
               
chr18:51765476-51764968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 207
               

               
Conread position:
               
329-837
               

               
Cow position:
               
chr18:54979578-54980086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 207
               

               
Conread position:
               
329-837
               

               
Cow position:
               
chr18:55017982-55018490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
329-837
               

               
Cow position:
               
chr18:56248220-56247707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 47
               

               
Conread position:
               
329-838
               

               
Cow position:
               
chr18:42675135-42674626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 385
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:40086918-40086405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:41949078-41948567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:41949246-41948735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:42985290-42984779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:43175506-43174995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 182
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:44253298-44252798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:49033196-49032685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 208
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:50048953-50048442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:50059605-50059094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 358
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:50083300-50083811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:52447042-52447553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 317
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:52447294-52447805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:53586897-53586386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 377
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:55017814-55018325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
329-840
               

               
Cow position:
               
chr18:56316151-56316662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
330-834
               

               
Cow position:
               
chr18:50031047-50030541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
332-829
               

               
Cow position:
               
chr18:49022667-49023164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
332-834
               

               
Cow position:
               
chr18:1417855-1418357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
332-835
               

               
Cow position:
               
chr18:51969282-51969779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
332-840
               

               
Cow position:
               
chr18:51752395-51751890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
332-840
               

               
Cow position:
               
chr18:51765557-51765049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-840
               

               
Cow position:
               
chr18:51789953-51789448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
332-840
               

               
Cow position:
               
chr18:51813112-51812607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
333-773
               

               
Cow position:
               
chr18:51969613-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
333-835
               

               
Cow position:
               
chr18:51968964-51969445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
333-835
               

               
Cow position:
               
chr18:56493779-56494284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 457
               

               
Conread position:
               
333-840
               

               
Cow position:
               
chr18:42675383-42674876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-840
               

               
Cow position:
               
chr18:43093729-43093225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
333-840
               

               
Cow position:
               
chr18:51752313-51751806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
334-656
               

               
Cow position:
               
chr18:42792583-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
334-749
               

               
Cow position:
               
chr18:50030793-50030378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 359
               

               
Conread position:
               
334-820
               

               
Cow position:
               
chr18:56330080-56329594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
334-840
               

               
Cow position:
               
chr18:52446806-52447301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 102
               

               
Conread position:
               
335-813
               

               
Cow position:
               
chr18:49022838-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
335-813
               

               
Cow position:
               
chr18:53498501-53498979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
335-827
               

               
Cow position:
               
chr18:33093082-33092591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 206
               

               
Conread position:
               
335-833
               

               
Cow position:
               
chr18:33092830-33092338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 186
               

               
Conread position:
               
335-834
               

               
Cow position:
               
chr18:40075047-40075546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 202
               

               
Conread position:
               
335-836
               

               
Cow position:
               
chr18:33064830-33064329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 206
               

               
Conread position:
               
335-838
               

               
Cow position:
               
chr18:49022420-49022921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 121
               

               
Conread position:
               
335-840
               

               
Cow position:
               
chr18:43167984-43168489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 362
               

               
Conread position:
               
335-840
               

               
Cow position:
               
chr18:44239781-44240286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 360
               

               
Conread position:
               
336-827
               

               
Cow position:
               
chr18:53586554-53586064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 201
               

               
Conread position:
               
337-740
               

               
Cow position:
               
chr18:42792502-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 208
               

               
Conread position:
               
337-840
               

               
Cow position:
               
chr18:51766137-51765637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 57
               

               
Conread position:
               
338-611
               

               
Cow position:
               
chr18:50849202-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
338-834
               

               
Cow position:
               
chr18:50281785-50282281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
338-840
               

               
Cow position:
               
chr18:51400307-51400809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 447
               

               
Conread position:
               
342-836
               

               
Cow position:
               
chr18:33064990-33064497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
344-607
               

               
Cow position:
               
chr18:51873733-51873996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-829
               

               
Cow position:
               
chr18:50059674-50059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 201
               

               
Conread position:
               
350-654
               

               
Cow position:
               
chr18:51873658-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
357-835
               

               
Cow position:
               
chr18:51400158-51400636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
360-840
               

               
Cow position:
               
chr18:44184921-44184441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 334
               

               
Conread position:
               
361-840
               

               
Cow position:
               
chr18:42675604-42675128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
362-840
               

               
Cow position:
               
chr18:43023104-43022626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
363-840
               

               
Cow position:
               
chr18:41949380-41948903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
363-840
               

               
Cow position:
               
chr18:44239725-44240202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
363-840
               

               
Cow position:
               
chr18:44254087-44253614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 187
               

               
Conread position:
               
366-836
               

               
Cow position:
               
chr18:53587112-53586642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
367-840
               

               
Cow position:
               
chr18:42837964-42837491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-822
               

               
Cow position:
               
chr18:49022619-49023073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
368-834
               

               
Cow position:
               
chr18:52012468-52012004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
368-834
               

               
Cow position:
               
chr18:56247756-56247298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 258
               

               
Conread position:
               
369-840
               

               
Cow position:
               
chr18:43167766-43168237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 328
               

               
Conread position:
               
372-829
               

               
Cow position:
               
chr18:42694155-42693698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
152, 165
               

               
Conread position:
               
372-840
               

               
Cow position:
               
chr18:49021628-49022097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
375-840
               

               
Cow position:
               
chr18:51400260-51400725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-647
               

               
Cow position:
               
chr18:51765176-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
168, 164
               

               
Conread position:
               
377-655
               

               
Cow position:
               
chr18:40251157-40251425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
377-757
               

               
Cow position:
               
chr18:50251149-50251529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
377-789
               

               
Cow position:
               
chr18:42724774-42724362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
377-821
               

               
Cow position:
               
chr18:50271443-50271887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
377-828
               

               
Cow position:
               
chr18:50098957-50099408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 160
               

               
Conread position:
               
377-834
               

               
Cow position:
               
chr18:50022508-50022045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
377-834
               

               
Cow position:
               
chr18:50245723-50246180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
377-835
               

               
Cow position:
               
chr18:1418068-1418526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
377-835
               

               
Cow position:
               
chr18:56330205-56329747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-836
               

               
Cow position:
               
chr18:50246143-50246602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
377-838
               

               
Cow position:
               
chr18:53610149-53609689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
377-839
               

               
Cow position:
               
chr18:50295254-50295716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
377-840
               

               
Cow position:
               
chr18:50083684-50084147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 163
               

               
Conread position:
               
377-840
               

               
Cow position:
               
chr18:50099125-50099588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
377-840
               

               
Cow position:
               
chr18:50271611-50272074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 320
               

               
Conread position:
               
377-840
               

               
Cow position:
               
chr18:51874045-51874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 116
               

               
Conread position:
               
377-840
               

               
Cow position:
               
chr18:55017778-55018241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
378-829
               

               
Cow position:
               
chr18:42694065-42693614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 164
               

               
Conread position:
               
378-836
               

               
Cow position:
               
chr18:43167609-43168065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
380-836
               

               
Cow position:
               
chr18:14454035-14453579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
380-836
               

               
Cow position:
               
chr18:42960314-42959858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
380-840
               

               
Cow position:
               
chr18:42985575-42985115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 161
               

               
Conread position:
               
381-836
               

               
Cow position:
               
chr18:52427535-52427990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 405
               

               
Conread position:
               
381-837
               

               
Cow position:
               
chr18:44398453-44397997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
381-840
               

               
Cow position:
               
chr18:50059721-50059262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
323, 310
               

               
Conread position:
               
381-840
               

               
Cow position:
               
chr18:52432884-52433343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 405
               

               
Conread position:
               
382-690
               

               
Cow position:
               
chr18:51969746-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
382-825
               

               
Cow position:
               
chr18:43048741-43048300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 400
               

               
Conread position:
               
382-836
               

               
Cow position:
               
chr18:52446927-52447381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 432
               

               
Conread position:
               
383-835
               

               
Cow position:
               
chr18:56315869-56316321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
383-840
               

               
Cow position:
               
chr18:40086948-40086489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 173
               

               
Conread position:
               
389-651
               

               
Cow position:
               
chr18:51751340-51751082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
163, 193
               

               
Conread position:
               
389-690
               

               
Cow position:
               
chr18:51882791-51883098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
112, 166
               

               
Conread position:
               
389-795
               

               
Cow position:
               
chr18:51874302-51874708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 392
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr18:53509232-53509663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 148
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr18:53525686-53526117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 148
               

               
Conread position:
               
389-827
               

               
Cow position:
               
chr18:55067116-55066679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
389-828
               

               
Cow position:
               
chr18:14453294-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
389-837
               

               
Cow position:
               
chr18:54992730-54993178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
389-838
               

               
Cow position:
               
chr18:43094000-43093563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 137
               

               
Conread position:
               
389-838
               

               
Cow position:
               
chr18:50848329-50848778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 149
               

               
Conread position:
               
389-838
               

               
Cow position:
               
chr18:51970334-51970775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
389-840
               

               
Cow position:
               
chr18:53497966-53498420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
389-840
               

               
Cow position:
               
chr18:54979470-54979921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
390-837
               

               
Cow position:
               
chr18:43175847-43175418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
385, 52
               

               
Conread position:
               
392-828
               

               
Cow position:
               
chr18:50250839-50251264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
392-840
               

               
Cow position:
               
chr18:33065109-33064661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
392-840
               

               
Cow position:
               
chr18:50245990-50246438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
393-834
               

               
Cow position:
               
chr18:56316047-56316488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 144
               

               
Conread position:
               
393-840
               

               
Cow position:
               
chr18:42675491-42675044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 141
               

               
Conread position:
               
393-840
               

               
Cow position:
               
chr18:42827402-42827849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 304
               

               
Conread position:
               
394-840
               

               
Cow position:
               
chr18:42744718-42744272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 139
               

               
Conread position:
               
395-836
               

               
Cow position:
               
chr18:51838786-51838350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
395-840
               

               
Cow position:
               
chr18:42724840-42724395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
210, 218
               

               
Conread position:
               
396-661
               

               
Cow position:
               
chr18:43053456-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
398-834
               

               
Cow position:
               
chr18:40306171-40306608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
398-834
               

               
Cow position:
               
chr18:53636125-53635689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 302
               

               
Conread position:
               
398-834
               

               
Cow position:
               
chr18:56128040-56128476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
375, 397
               

               
Conread position:
               
401-838
               

               
Cow position:
               
chr18:49021492-49021926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
401-840
               

               
Cow position:
               
chr18:33093100-33092661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 222
               

               
Conread position:
               
404-840
               

               
Cow position:
               
chr18:41197500-41197936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 381
               

               
Conread position:
               
404-840
               

               
Cow position:
               
chr18:53610542-53610106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 130
               

               
Conread position:
               
407-801
               

               
Cow position:
               
chr18:53571823-53572206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
407-832
               

               
Cow position:
               
chr18:55523320-55523744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
407-834
               

               
Cow position:
               
chr18:53559686-53560113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
409-777
               

               
Cow position:
               
chr18:50031136-50030769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
410-836
               

               
Cow position:
               
chr18:50098906-50099332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
411-834
               

               
Cow position:
               
chr18:50295204-50295627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
416-826
               

               
Cow position:
               
chr18:43167561-43167970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
154, 142
               

               
Conread position:
               
420-827
               

               
Cow position:
               
chr18:54992677-54993083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
115, 96
               

               
Conread position:
               
434-840
               

               
Cow position:
               
chr18:52012486-52012082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
448-840
               

               
Cow position:
               
chr18:51874032-51874417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 127
               

               
Conread position:
               
453-836
               

               
Cow position:
               
chr18:52427523-52427906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
453-836
               

               
Cow position:
               
chr18:52432872-52433255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
453-840
               

               
Cow position:
               
chr18:40086962-40086579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
454-823
               

               
Cow position:
               
chr18:50059732-50059363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
455-836
               

               
Cow position:
               
chr18:44398463-44398082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
461-836
               

               
Cow position:
               
chr18:50049245-50048866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 330
               

               
Conread position:
               
461-836
               

               
Cow position:
               
chr18:51971369-51971735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
461-840
               

               
Cow position:
               
chr18:50271443-50271822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
160, 148
               

               
Conread position:
               
461-840
               

               
Cow position:
               
chr18:55008459-55008836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
462-837
               

               
Cow position:
               
chr18:42985577-42985202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 164
               

               
Conread position:
               
462-840
               

               
Cow position:
               
chr18:14454037-14453659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 238
               

               
Conread position:
               
463-823
               

               
Cow position:
               
chr18:50083266-50083626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
463-840
               

               
Cow position:
               
chr18:44154470-44154090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
466-834
               

               
Cow position:
               
chr18:50848071-50848438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
467-810
               

               
Cow position:
               
chr18:51873689-51874032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
325, 18
               

               
Conread position:
               
467-836
               

               
Cow position:
               
chr18:43048740-43048371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
467-837
               

               
Cow position:
               
chr18:51368782-51368412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
469-736
               

               
Cow position:
               
chr18:51751344-51751081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
165, 196
               

               
Conread position:
               
469-837
               

               
Cow position:
               
chr18:42744727-42744359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 139
               

               
Conread position:
               
469-840
               

               
Cow position:
               
chr18:56248328-56247966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
471-835
               

               
Cow position:
               
chr18:53509230-53509594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
471-840
               

               
Cow position:
               
chr18:53525684-53526053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
472-811
               

               
Cow position:
               
chr18:53497965-53498301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
473-840
               

               
Cow position:
               
chr18:55067116-55066749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
476-834
               

               
Cow position:
               
chr18:42790877-42791235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
226, 221
               

               
Conread position:
               
477-840
               

               
Cow position:
               
chr18:56316047-56316410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
479-829
               

               
Cow position:
               
chr18:42724588-42724238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
483-840
               

               
Cow position:
               
chr18:40306173-40306530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
309, 302
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr18:55523320-55523663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
493-840
               

               
Cow position:
               
chr18:56128051-56128398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 201
               

               
Conread position:
               
503-836
               

               
Cow position:
               
chr18:43094215-43093889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
506-834
               

               
Cow position:
               
chr18:53587140-53586812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
506-840
               

               
Cow position:
               
chr18:50281701-50282035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
507-840
               

               
Cow position:
               
chr18:50295216-50295549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
529-832
               

               
Cow position:
               
chr18:43053496-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
531-840
               

               
Cow position:
               
chr18:42837968-42837659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
176, 163
               

               
Conread position:
               
531-840
               

               
Cow position:
               
chr18:44154486-44154174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
535-840
               

               
Cow position:
               
chr18:42985588-42985283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-830
               

               
Cow position:
               
chr18:50271434-50271728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
168, 149
               

               
Conread position:
               
536-837
               

               
Cow position:
               
chr18:54979449-54979750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-838
               

               
Cow position:
               
chr18:54966924-54967226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
239, 251
               

               
Conread position:
               
537-840
               

               
Cow position:
               
chr18:42744740-42744440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
541-836
               

               
Cow position:
               
chr18:42960483-42960194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
543-810
               

               
Cow position:
               
chr18:22634538-22634803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
543-834
               

               
Cow position:
               
chr18:50049247-50048952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
543-840
               

               
Cow position:
               
chr18:42827384-42827681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 154
               

               
Conread position:
               
545-827
               

               
Cow position:
               
chr18:40251157-40251429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
547-836
               

               
Cow position:
               
chr18:33093122-33092833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
551-835
               

               
Cow position:
               
chr18:51873689-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
551-837
               

               
Cow position:
               
chr18:43048740-43048454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
556-830
               

               
Cow position:
               
chr18:50295183-50295455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
556-836
               

               
Cow position:
               
chr18:50250835-50251107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
556-840
               

               
Cow position:
               
chr18:55523301-55523585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 155
               

               
Conread position:
               
564-840
               

               
Cow position:
               
chr18:49033382-49033105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
577-834
               

               
Cow position:
               
chr18:50098905-50099162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 120
               

               
Conread position:
               
587-817
               

               
Cow position:
               
chr18:55075112-55075343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
165, 201
               

               
Conread position:
               
602-840
               

               
Cow position:
               
chr18:42837980-42837743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
624-840
               

               
Cow position:
               
chr18:44398462-44398246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
634-840
               

               
Cow position:
               
chr18:43048741-43048535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 59
               
Show alignments to all cow chromosomes.