Cow genome map

Conread name: Ss1.1-rpldo0139_p24.5

Conread position: 298-840
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 298-840
Cow position:
Alignm length: 543
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 307-823
Cow position:
Alignm length: 520
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 74

Conread position: 311-840
Cow position:
Alignm length: 533
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 15

Conread position: 311-840
Cow position:
Alignm length: 532
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 128

Conread position: 311-840
Cow position:
Alignm length: 532
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 305

Conread position: 311-840
Cow position:
Alignm length: 535
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 312-730
Cow position:
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 312-836
Cow position:
Alignm length: 526
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 382

Conread position: 312-840
Cow position:
Alignm length: 530
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 222

Conread position: 312-840
Cow position:
Alignm length: 530
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 313-580
Cow position:
Alignm length: 269
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 232, 228

Conread position: 313-643
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 206, 197

Conread position: 313-648
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 313, 39

Conread position: 313-657
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 311

Conread position: 313-689
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 223

Conread position: 313-689
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 222

Conread position: 313-696
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 311

Conread position: 313-740
Cow position:
Alignm length: 433
Alignm identity: 272
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 87

Conread position: 313-803
Cow position:
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 199

Conread position: 313-824
Cow position:
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 224

Conread position: 313-829
Cow position:
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 217

Conread position: 313-834
Cow position:
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-834
Cow position:
Alignm length: 524
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 469

Conread position: 313-834
Cow position:
Alignm length: 523
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 313-834
Cow position:
Alignm length: 522
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-836
Cow position:
Alignm length: 525
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 380

Conread position: 313-836
Cow position:
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-836
Cow position:
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 223

Conread position: 313-836
Cow position:
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 313-836
Cow position:
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 371

Conread position: 313-838
Cow position:
Alignm length: 526
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-839
Cow position:
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 221

Conread position: 313-840
Cow position:
Alignm length: 528
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-840
Cow position:
Alignm length: 530
Alignm identity: 335
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 146, 80

Conread position: 313-840
Cow position:
Alignm length: 531
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 126

Conread position: 313-840
Cow position:
Alignm length: 531
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 470

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 225

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 222

Conread position: 313-840
Cow position:
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 225

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 197

Conread position: 313-840
Cow position:
Alignm length: 531
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 55

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 393

Conread position: 314-835
Cow position:
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 314-835
Cow position:
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 216

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 299

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 496

Conread position: 314-840
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 377

Conread position: 315-823
Cow position:
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 222

Conread position: 315-840
Cow position:
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 320-837
Cow position:
Alignm length: 520
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 11

Conread position: 322-840
Cow position:
Alignm length: 520
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 370

Conread position: 324-834
Cow position:
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 325-766
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 325-839
Cow position:
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 176

Conread position: 327-840
Cow position:
Alignm length: 516
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 118

Conread position: 328-565
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 204, 197

Conread position: 329-832
Cow position:
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 464

Conread position: 329-833
Cow position:
Alignm length: 509
Alignm identity: 323
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 150

Conread position: 329-840
Cow position:
Alignm length: 512
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 329-840
Cow position:
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 459

Conread position: 329-840
Cow position:
Alignm length: 514
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 194

Conread position: 329-840
Cow position:
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 206

Conread position: 331-834
Cow position:
Alignm length: 509
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 206

Conread position: 334-834
Cow position:
Alignm length: 502
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 61

Conread position: 338-832
Cow position:
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 376-819
Cow position:
Alignm length: 445
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 82

Conread position: 376-837
Cow position:
Alignm length: 463
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 401, 408

Conread position: 377-840
Cow position:
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 0

Conread position: 377-840
Cow position:
Alignm length: 464
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 380-820
Cow position:
Alignm length: 441
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 380-834
Cow position:
Alignm length: 455
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 382-840
Cow position:
Alignm length: 466
Alignm identity: 301
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 49, 28

Conread position: 382-840
Cow position:
Alignm length: 460
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 315

Conread position: 389-831
Cow position:
Alignm length: 447
Alignm identity: 285
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 10

Conread position: 395-840
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 395-840
Cow position:
Alignm length: 447
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 142

Conread position: 416-840
Cow position:
Alignm length: 425
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 418-823
Cow position:
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 450-840
Cow position:
Alignm length: 392
Alignm identity: 244
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 198

Conread position: 451-834
Cow position:
Alignm length: 385
Alignm identity: 242
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 44

Conread position: 453-840
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 536-840
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 168, 12

Show alignments to all cow chromosomes.