Cow genome map
| Conread name: | Ss1.1-rpldo0139_p24.5 |
| Conread position: | 312-820 |
| Cow position: | chr2:5874847-5874339 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 233, 229 |
| Conread position: | 313-563 |
| Cow position: | chr2:82800198-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 313-771 |
| Cow position: | chr2:78754346-78754798 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 389, 97 |
| Conread position: | 313-834 |
| Cow position: | chr2:78755668-78756190 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 197, 238 |
| Conread position: | 313-837 |
| Cow position: | chr2:78754916-78755439 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 224 |
| Conread position: | 314-772 |
| Cow position: | chr2:86465183-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 222, 198 |
| Conread position: | 314-823 |
| Cow position: | chr2:78755837-78756345 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 277 |
| Conread position: | 314-834 |
| Cow position: | chr2:82799863-82800383 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 212 |
| Conread position: | 314-840 |
| Cow position: | chr2:78755336-78755859 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 472, 177 |
| Conread position: | 316-840 |
| Cow position: | chr2:78755589-78756112 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 209, 78 |
| Conread position: | 316-840 |
| Cow position: | chr2:86465101-86465625 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 216, 206 |
| Conread position: | 317-829 |
| Cow position: | chr2:78754182-78754691 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 143, 152 |
| Conread position: | 321-832 |
| Cow position: | chr2:78754107-78754611 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 10 |
| Conread position: | 325-840 |
| Cow position: | chr2:82799538-82800053 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 217 |
| Conread position: | 326-815 |
| Cow position: | chr2:82799959-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 197 |
| Conread position: | 326-835 |
| Cow position: | chr2:86465363-86465872 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 198, 248 |
| Conread position: | 326-840 |
| Cow position: | chr2:82799707-82800221 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 327-835 |
| Cow position: | chr2:82799792-82800300 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 219 |
| Conread position: | 328-700 |
| Cow position: | chr2:5875167-5874796 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 329-834 |
| Cow position: | chr2:78754848-78755352 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 329-837 |
| Cow position: | chr2:82799626-82800134 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-840 |
| Cow position: | chr2:78754695-78755191 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 34 |
| Conread position: | 334-834 |
| Cow position: | chr2:78754449-78754933 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 324 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 338-840 |
| Cow position: | chr2:82799467-82799969 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 199 |
| Conread position: | 377-836 |
| Cow position: | chr2:78754812-78755271 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 314 |
| Conread position: | 380-740 |
| Cow position: | chr2:78756072-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 389-772 |
| Cow position: | chr2:86465510-86465893 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 397-767 |
| Cow position: | chr2:48689542-48689172 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 422-840 |
| Cow position: | chr2:82799467-82799885 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 115 |
| Conread position: | 496-840 |
| Cow position: | chr2:82799457-82799801 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-835 |
| Cow position: | chr2:48689480-48689188 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 548-840 |
| Cow position: | chr2:82799424-82799717 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 274 |
Show alignments to all cow chromosomes.