Cow genome map

Conread name: Ss1.1-rpldo0139_p24.5

Conread position: 295-840
Cow position:
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 100

Conread position: 295-840
Cow position:
Alignm length: 550
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 245

Conread position: 307-836
Cow position:
Alignm length: 530
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 307-840
Cow position:
Alignm length: 537
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 87

Conread position: 308-840
Cow position:
Alignm length: 535
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 61

Conread position: 311-834
Cow position:
Alignm length: 525
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 311-835
Cow position:
Alignm length: 533
Alignm identity: 334
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 59

Conread position: 312-771
Cow position:
Alignm length: 461
Alignm identity: 275
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 381, 398

Conread position: 313-571
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 207, 220

Conread position: 313-642
Cow position:
Alignm length: 331
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 133

Conread position: 313-657
Cow position:
Alignm length: 345
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 313-662
Cow position:
Alignm length: 351
Alignm identity: 224
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 215, 224

Conread position: 313-681
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 222

Conread position: 313-736
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 393

Conread position: 313-738
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 223

Conread position: 313-738
Cow position:
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 385

Conread position: 313-741
Cow position:
Alignm length: 432
Alignm identity: 259
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 389, 378

Conread position: 313-773
Cow position:
Alignm length: 469
Alignm identity: 301
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 41

Conread position: 313-823
Cow position:
Alignm length: 512
Alignm identity: 300
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 298, 294

Conread position: 313-827
Cow position:
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 479

Conread position: 313-834
Cow position:
Alignm length: 522
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-834
Cow position:
Alignm length: 526
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 296

Conread position: 313-834
Cow position:
Alignm length: 525
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 56

Conread position: 313-835
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 313-835
Cow position:
Alignm length: 524
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 384

Conread position: 313-835
Cow position:
Alignm length: 531
Alignm identity: 325
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 53

Conread position: 313-835
Cow position:
Alignm length: 524
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 296

Conread position: 313-836
Cow position:
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 134

Conread position: 313-836
Cow position:
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 229

Conread position: 313-837
Cow position:
Alignm length: 529
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 214

Conread position: 313-837
Cow position:
Alignm length: 529
Alignm identity: 326
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 149, 134

Conread position: 313-840
Cow position:
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 224

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 373

Conread position: 313-840
Cow position:
Alignm length: 530
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 227

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 384

Conread position: 313-840
Cow position:
Alignm length: 528
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 475

Conread position: 314-559
Cow position:
Alignm length: 248
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 141, 131

Conread position: 314-570
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 141, 131

Conread position: 314-655
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 314-687
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 209, 218

Conread position: 314-826
Cow position:
Alignm length: 514
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 220

Conread position: 314-834
Cow position:
Alignm length: 522
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 307

Conread position: 314-835
Cow position:
Alignm length: 523
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 222

Conread position: 314-836
Cow position:
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 314-836
Cow position:
Alignm length: 525
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 314-836
Cow position:
Alignm length: 524
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 386

Conread position: 314-836
Cow position:
Alignm length: 524
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 383

Conread position: 314-837
Cow position:
Alignm length: 524
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-837
Cow position:
Alignm length: 525
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 399

Conread position: 314-838
Cow position:
Alignm length: 526
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 463

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 133

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 216

Conread position: 314-840
Cow position:
Alignm length: 528
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 211

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-840
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 399

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 315-834
Cow position:
Alignm length: 523
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 137

Conread position: 315-840
Cow position:
Alignm length: 543
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 315-840
Cow position:
Alignm length: 526
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 315-840
Cow position:
Alignm length: 527
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 221

Conread position: 315-840
Cow position:
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 219

Conread position: 315-840
Cow position:
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 212

Conread position: 316-821
Cow position:
Alignm length: 510
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 222

Conread position: 316-837
Cow position:
Alignm length: 525
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 222

Conread position: 316-840
Cow position:
Alignm length: 531
Alignm identity: 311
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 51

Conread position: 317-737
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 0

Conread position: 317-835
Cow position:
Alignm length: 521
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 232

Conread position: 317-837
Cow position:
Alignm length: 525
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 291

Conread position: 321-835
Cow position:
Alignm length: 519
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 325-819
Cow position:
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 325-837
Cow position:
Alignm length: 515
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 286

Conread position: 326-822
Cow position:
Alignm length: 500
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 121

Conread position: 326-822
Cow position:
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 460

Conread position: 326-822
Cow position:
Alignm length: 498
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 459

Conread position: 326-840
Cow position:
Alignm length: 517
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 291

Conread position: 328-835
Cow position:
Alignm length: 514
Alignm identity: 306
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 242, 195

Conread position: 328-840
Cow position:
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 384

Conread position: 329-772
Cow position:
Alignm length: 449
Alignm identity: 273
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 56

Conread position: 329-814
Cow position:
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 329-820
Cow position:
Alignm length: 495
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 369

Conread position: 329-823
Cow position:
Alignm length: 496
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 208

Conread position: 329-835
Cow position:
Alignm length: 507
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 329-837
Cow position:
Alignm length: 511
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 208

Conread position: 329-840
Cow position:
Alignm length: 513
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 457

Conread position: 329-840
Cow position:
Alignm length: 518
Alignm identity: 317
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 34

Conread position: 333-836
Cow position:
Alignm length: 507
Alignm identity: 310
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 129, 106

Conread position: 335-835
Cow position:
Alignm length: 502
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 335-840
Cow position:
Alignm length: 507
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 360

Conread position: 380-840
Cow position:
Alignm length: 478
Alignm identity: 276
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 234, 0

Conread position: 381-836
Cow position:
Alignm length: 459
Alignm identity: 281
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 9

Conread position: 381-840
Cow position:
Alignm length: 461
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 156

Conread position: 389-835
Cow position:
Alignm length: 448
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 220

Conread position: 392-840
Cow position:
Alignm length: 452
Alignm identity: 284
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 321, 303

Conread position: 395-840
Cow position:
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 158

Conread position: 395-840
Cow position:
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 157

Conread position: 397-840
Cow position:
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 220

Conread position: 400-840
Cow position:
Alignm length: 441
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 406-837
Cow position:
Alignm length: 436
Alignm identity: 282
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 139, 124

Conread position: 406-840
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 124

Conread position: 461-840
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 461-840
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 461-840
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 461-840
Cow position:
Alignm length: 380
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 462-836
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 470-834
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 67

Conread position: 499-835
Cow position:
Alignm length: 338
Alignm identity: 209
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 120

Conread position: 503-835
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 34

Conread position: 529-840
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 534-806
Cow position:
Alignm length: 276
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 20

Conread position: 543-834
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 20

Conread position: 543-837
Cow position:
Alignm length: 295
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 543-840
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 544-837
Cow position:
Alignm length: 294
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 546-840
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 575-840
Cow position:
Alignm length: 269
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 114, 127

Conread position: 622-829
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.