Cow genome map


           Conread name:
           Ss1.1-rpldo0139_p24.5
        

               Conread position:
               313-823
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 18
               

               Conread position:
               313-826
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 228
               

               Conread position:
               313-834
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-835
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 122
               

               Conread position:
               313-835
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 387
               

               Conread position:
               313-835
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 224
               

               Conread position:
               313-837
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-838
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               314-820
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 312
               

               Conread position:
               314-834
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 295
               

               Conread position:
               314-835
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-836
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 227
               

               Conread position:
               314-837
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-656
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 226
               

               Conread position:
               326-837
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               327-834
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               377, 365
               

               Conread position:
               329-840
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               469, 464
               

               Conread position:
               334-744
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 203
               

               Conread position:
               338-840
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 288
               

               Conread position:
               344-840
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 5
               

               Conread position:
               345-840
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 349
               

               Conread position:
               377-837
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               380-612
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               381-773
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 156
               

               Conread position:
               411-836
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               443-840
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-835
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 141
               

               Conread position:
               477-696
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               129, 117
               

               Conread position:
               561-791
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-840
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.