Cow genome map
| Conread name: | Ss1.1-rpldo0139_p24.5 |
| Conread position: | 313-823 |
| Cow position: | chr24:17070544-17071052 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 18 |
| Conread position: | 313-826 |
| Cow position: | chr24:17035539-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 228 |
| Conread position: | 313-834 |
| Cow position: | chr24:17035875-17035354 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-835 |
| Cow position: | chr24:17035455-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 122 |
| Conread position: | 313-835 |
| Cow position: | chr24:17035623-17035101 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 387 |
| Conread position: | 313-835 |
| Cow position: | chr24:17035959-17035437 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 224 |
| Conread position: | 313-837 |
| Cow position: | chr24:17036043-17035519 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-838 |
| Cow position: | chr24:17036295-17035770 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 113 |
| Conread position: | 314-820 |
| Cow position: | chr24:17078009-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 312 |
| Conread position: | 314-834 |
| Cow position: | chr24:17036126-17035606 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 295 |
| Conread position: | 314-835 |
| Cow position: | chr24:17035706-17035185 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-836 |
| Cow position: | chr24:17078093-17077571 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 227 |
| Conread position: | 314-837 |
| Cow position: | chr24:17036546-17036023 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-656 |
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 226 |
| Conread position: | 326-837 |
| Cow position: | chr24:17036366-17035855 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 112 |
| Conread position: | 327-834 |
| Cow position: | chr24:17070472-17070979 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 365 |
| Conread position: | 329-840 |
| Cow position: | chr24:17035775-17035264 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 469, 464 |
| Conread position: | 334-744 |
| Cow position: | chr24:17070647-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 203 |
| Conread position: | 338-840 |
| Cow position: | chr24:17078153-17077651 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 288 |
| Conread position: | 344-840 |
| Cow position: | chr24:17036431-17035936 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 5 |
| Conread position: | 345-840 |
| Cow position: | chr24:17036180-17035684 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 349 |
| Conread position: | 377-837 |
| Cow position: | chr24:17070438-17070898 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-612 |
| Cow position: | chr24:16986412-16986644 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-773 |
| Cow position: | chr24:17013147-17013537 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 156 |
| Conread position: | 411-836 |
| Cow position: | chr24:17070388-17070813 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 443-840 |
| Cow position: | chr24:17078384-17077987 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-835 |
| Cow position: | chr24:17013149-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 141 |
| Conread position: | 477-696 |
| Cow position: | chr24:16986425-16986644 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 129, 117 |
| Conread position: | 561-791 |
| Cow position: | chr24:16986425-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 578-840 |
| Cow position: | chr24:17036615-17036356 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.