Cow genome map

Conread name: Ss1.1-rpldo0139_p24.5

Conread position: 166-823
Cow position:
Alignm length: 676
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 548

Conread position: 307-817
Cow position:
Alignm length: 516
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 203, 225

Conread position: 308-837
Cow position:
Alignm length: 531
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 475

Conread position: 312-583
Cow position:
Alignm length: 272
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 312-694
Cow position:
Alignm length: 383
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 312-837
Cow position:
Alignm length: 530
Alignm identity: 330
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 43

Conread position: 313-699
Cow position:
Alignm length: 390
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 127

Conread position: 313-770
Cow position:
Alignm length: 460
Alignm identity: 293
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 219, 39

Conread position: 313-771
Cow position:
Alignm length: 460
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 0

Conread position: 313-782
Cow position:
Alignm length: 471
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 389, 384

Conread position: 313-823
Cow position:
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 384

Conread position: 313-837
Cow position:
Alignm length: 526
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 224

Conread position: 313-840
Cow position:
Alignm length: 530
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 384

Conread position: 313-840
Cow position:
Alignm length: 532
Alignm identity: 318
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 205, 77

Conread position: 314-691
Cow position:
Alignm length: 385
Alignm identity: 245
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 212, 83

Conread position: 314-736
Cow position:
Alignm length: 428
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 314-810
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 217

Conread position: 314-827
Cow position:
Alignm length: 515
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 383

Conread position: 314-827
Cow position:
Alignm length: 516
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 299

Conread position: 314-832
Cow position:
Alignm length: 525
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 119

Conread position: 314-834
Cow position:
Alignm length: 522
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 372

Conread position: 314-834
Cow position:
Alignm length: 526
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 51

Conread position: 314-835
Cow position:
Alignm length: 525
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 132

Conread position: 314-837
Cow position:
Alignm length: 527
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 93

Conread position: 314-838
Cow position:
Alignm length: 527
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 314-838
Cow position:
Alignm length: 528
Alignm identity: 318
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 216, 223

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 383

Conread position: 314-840
Cow position:
Alignm length: 531
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 187

Conread position: 315-790
Cow position:
Alignm length: 478
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 223

Conread position: 317-814
Cow position:
Alignm length: 501
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 219

Conread position: 323-836
Cow position:
Alignm length: 515
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 24

Conread position: 325-812
Cow position:
Alignm length: 493
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 168

Conread position: 325-840
Cow position:
Alignm length: 518
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 166

Conread position: 326-621
Cow position:
Alignm length: 298
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 204, 223

Conread position: 326-837
Cow position:
Alignm length: 523
Alignm identity: 324
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 185, 206

Conread position: 327-829
Cow position:
Alignm length: 507
Alignm identity: 312
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 41

Conread position: 327-835
Cow position:
Alignm length: 509
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 327-837
Cow position:
Alignm length: 512
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 329-766
Cow position:
Alignm length: 442
Alignm identity: 285
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 197, 65

Conread position: 331-840
Cow position:
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 332-836
Cow position:
Alignm length: 509
Alignm identity: 304
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 308, 57

Conread position: 333-833
Cow position:
Alignm length: 503
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 254

Conread position: 333-840
Cow position:
Alignm length: 509
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 364

Conread position: 334-777
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 30

Conread position: 334-835
Cow position:
Alignm length: 507
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 335-835
Cow position:
Alignm length: 504
Alignm identity: 300
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 221, 203

Conread position: 336-840
Cow position:
Alignm length: 509
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 27

Conread position: 361-840
Cow position:
Alignm length: 486
Alignm identity: 316
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 101, 49

Conread position: 362-840
Cow position:
Alignm length: 483
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 176

Conread position: 377-836
Cow position:
Alignm length: 460
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 380-836
Cow position:
Alignm length: 462
Alignm identity: 288
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 225

Conread position: 394-798
Cow position:
Alignm length: 408
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 209

Conread position: 397-834
Cow position:
Alignm length: 441
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 216

Conread position: 405-771
Cow position:
Alignm length: 370
Alignm identity: 232
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 215, 206

Conread position: 407-835
Cow position:
Alignm length: 431
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 223, 206

Conread position: 478-836
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 485-835
Cow position:
Alignm length: 355
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 155, 137

Conread position: 499-840
Cow position:
Alignm length: 344
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 47

Show alignments to all cow chromosomes.