Cow genome map


           Conread name:
           Ss1.1-rpldo0139_p24.5
        

               Conread position:
               297-840
               

               Cow position:
               chr4:42315305-42314762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               340
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               313-772
               

               Cow position:
               chr4:42314114-42313661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               227, 184
               

               Conread position:
               313-835
               

               Cow position:
               chr4:42314953-42314432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               314-840
               

               Cow position:
               chr4:42314533-42314007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               322
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               255, 171
               

               Conread position:
               325-835
               

               Cow position:
               chr4:42314438-42313928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               129, 79
               

               Conread position:
               325-837
               

               Cow position:
               chr4:42314689-42314178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               137, 37
               

               Conread position:
               338-832
               

               Cow position:
               chr4:42314257-42313768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 30
               
Show alignments to all cow chromosomes.