Cow genome map
| Conread name: | Ss1.1-rpldo0139_p24.5 |
| Conread position: | 312-837 |
| Cow position: | chr6:49340162-49340675 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 312-837 |
| Cow position: | chr6:49340402-49340927 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 218 |
| Conread position: | 313-683 |
| Cow position: | chr6:49396544-49396914 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-696 |
| Cow position: | chr6:49341075-49341456 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 0 |
| Conread position: | 313-838 |
| Cow position: | chr6:49340571-49341096 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 217 |
| Conread position: | 313-838 |
| Cow position: | chr6:49340907-49341432 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 218 |
| Conread position: | 314-686 |
| Cow position: | chr6:49429152-49429523 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 233, 220 |
| Conread position: | 314-835 |
| Cow position: | chr6:49396293-49396814 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-840 |
| Cow position: | chr6:49340488-49341014 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 221 |
| Conread position: | 325-597 |
| Cow position: | chr6:49396724-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 220, 215 |
| Conread position: | 327-834 |
| Cow position: | chr6:49340669-49341176 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-696 |
| Cow position: | chr6:49428326-49428694 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 329-837 |
| Cow position: | chr6:49340755-49341263 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-837 |
| Cow position: | chr6:49340839-49341347 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-835 |
| Cow position: | chr6:49396226-49396730 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-840 |
| Cow position: | chr6:49396485-49396987 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 118 |
| Conread position: | 340-840 |
| Cow position: | chr6:49395905-49396399 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 319, 0 |
| Conread position: | 342-696 |
| Cow position: | chr6:49361958-49362313 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 193 |
| Conread position: | 343-683 |
| Cow position: | chr6:49396658-49396998 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-822 |
| Cow position: | chr6:49429046-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 152, 161 |
| Conread position: | 376-838 |
| Cow position: | chr6:49428962-49429424 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 399, 405 |
| Conread position: | 395-831 |
| Cow position: | chr6:49395792-49396228 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 196, 187 |
| Conread position: | 467-837 |
| Cow position: | chr6:49340389-49340759 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 320 |
Show alignments to all cow chromosomes.