Cow genome map

Conread name: Ss1.1-rpldo0139_p24.5

Conread position: 311-814
Cow position:
Alignm length: 513
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 0

Conread position: 312-835
Cow position:
Alignm length: 525
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 385

Conread position: 312-835
Cow position:
Alignm length: 526
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 387

Conread position: 313-514
Cow position:
Alignm length: 203
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 177

Conread position: 313-605
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 313-681
Cow position:
Alignm length: 371
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 208, 226

Conread position: 313-771
Cow position:
Alignm length: 459
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 313-834
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 66

Conread position: 313-836
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 386

Conread position: 313-836
Cow position:
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 219

Conread position: 313-836
Cow position:
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 219

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 470

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 384

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 382

Conread position: 313-840
Cow position:
Alignm length: 529
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 385

Conread position: 314-815
Cow position:
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-829
Cow position:
Alignm length: 519
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 218

Conread position: 314-837
Cow position:
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 139

Conread position: 314-837
Cow position:
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-837
Cow position:
Alignm length: 525
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 223

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 383

Conread position: 314-840
Cow position:
Alignm length: 529
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 379

Conread position: 314-840
Cow position:
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 316-836
Cow position:
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 221

Conread position: 316-837
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 324-840
Cow position:
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 216

Conread position: 325-835
Cow position:
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 212

Conread position: 325-835
Cow position:
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 129

Conread position: 327-736
Cow position:
Alignm length: 412
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 215

Conread position: 327-840
Cow position:
Alignm length: 518
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 42

Conread position: 327-840
Cow position:
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 210

Conread position: 328-836
Cow position:
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 329-829
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 133

Conread position: 329-834
Cow position:
Alignm length: 508
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 361

Conread position: 329-840
Cow position:
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 369

Conread position: 331-834
Cow position:
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 201

Conread position: 335-811
Cow position:
Alignm length: 479
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 197

Conread position: 335-835
Cow position:
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 197

Conread position: 377-840
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 410

Conread position: 381-836
Cow position:
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 389-835
Cow position:
Alignm length: 452
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 214

Conread position: 397-838
Cow position:
Alignm length: 443
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 398-824
Cow position:
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 389

Conread position: 401-840
Cow position:
Alignm length: 443
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 63

Conread position: 455-836
Cow position:
Alignm length: 384
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 87

Conread position: 481-840
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 218

Conread position: 545-839
Cow position:
Alignm length: 296
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 99

Conread position: 556-836
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 66

Conread position: 565-837
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 47, 31

Conread position: 587-837
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 671-840
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 26

Show alignments to all cow chromosomes.