Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               422, 433
               

               Conread position:
               3-545
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-539
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               5-481
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               472, 468
               

               Conread position:
               5-543
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 9
               

               Conread position:
               8-253
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               12-200
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-401
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               341, 270
               

               Conread position:
               13-284
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               62, 68
               

               Conread position:
               13-323
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               13-570
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               14-368
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-438
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               14-544
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               14-571
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 219
               

               Conread position:
               16-452
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-410
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               35-525
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 147
               

               Conread position:
               59-512
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               79-571
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 355
               

               Conread position:
               95-536
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 5
               

               Conread position:
               102-571
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               154-570
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               184-555
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               233-570
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               333, 310
               
Show alignments to all cow chromosomes.