Cow genome map
| Conread name: | Ss1.1-rpliv0106_m24.5 |
| Conread position: | 1-240 |
| Cow position: | chr14:681031-681270 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 1-366 |
| Cow position: | chr14:3156118-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 1-372 |
| Cow position: | chr14:25860412-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 1-409 |
| Cow position: | chr14:25877463-25877871 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 1-543 |
| Cow position: | chr14:3101116-3100579 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 1-544 |
| Cow position: | chr14:25836267-25836810 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 347 |
| Conread position: | 1-555 |
| Cow position: | chr14:25835679-25836232 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 234, 190 |
| Conread position: | 1-555 |
| Cow position: | chr14:25876707-25877260 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 1-570 |
| Cow position: | chr14:25836183-25836752 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 332 |
| Conread position: | 1-570 |
| Cow position: | chr14:25859404-25859973 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 348 |
| Conread position: | 1-571 |
| Cow position: | chr14:25795382-25794813 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 2-324 |
| Cow position: | chr14:25784405-25784727 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 247, 263 |
| Conread position: | 2-408 |
| Cow position: | chr14:25784237-25784643 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 145 |
| Conread position: | 2-544 |
| Cow position: | chr14:25859322-25859863 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 2-555 |
| Cow position: | chr14:25876624-25877176 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 2-570 |
| Cow position: | chr14:25783901-25784469 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 145 |
| Conread position: | 2-571 |
| Cow position: | chr14:25783481-25784049 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 148 |
| Conread position: | 2-571 |
| Cow position: | chr14:25795129-25794560 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 3-204 |
| Cow position: | chr14:25837025-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-397 |
| Cow position: | chr14:25794540-25794147 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 212, 339 |
| Conread position: | 3-403 |
| Cow position: | chr14:680865-681265 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-464 |
| Cow position: | chr14:3080120-3079657 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 3-464 |
| Cow position: | chr14:25860163-25860623 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 9 |
| Conread position: | 3-464 |
| Cow position: | chr14:25895168-25895629 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 335, 344 |
| Conread position: | 3-471 |
| Cow position: | chr14:3080708-3080240 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-480 |
| Cow position: | chr14:25895672-25896149 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 301 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 3-481 |
| Cow position: | chr14:447727-448205 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 3-486 |
| Cow position: | chr14:25910803-25911284 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 3-543 |
| Cow position: | chr14:3080456-3079916 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 3-543 |
| Cow position: | chr14:3127968-3127428 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 347 |
| Conread position: | 3-544 |
| Cow position: | chr14:680697-681238 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 327 |
| Conread position: | 3-553 |
| Cow position: | chr14:25877214-25877762 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 9 |
| Conread position: | 4-547 |
| Cow position: | chr14:25895001-25895542 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 5-543 |
| Cow position: | chr14:3128050-3127512 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 5-555 |
| Cow position: | chr14:25794874-25794324 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 157 |
| Conread position: | 8-550 |
| Cow position: | chr14:25794703-25794160 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 173 |
| Conread position: | 10-442 |
| Cow position: | chr14:25836780-25837212 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-486 |
| Cow position: | chr14:25895511-25895987 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 10-571 |
| Cow position: | chr14:3128213-3127652 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 348 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 168, 173 |
| Conread position: | 11-462 |
| Cow position: | chr14:25895848-25896299 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 11-570 |
| Cow position: | chr14:25836109-25836668 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 170 |
| Conread position: | 13-325 |
| Cow position: | chr14:3127622-3127310 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 13-409 |
| Cow position: | chr14:680203-680599 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 13-459 |
| Cow position: | chr14:3155389-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 409, 421 |
| Conread position: | 13-493 |
| Cow position: | chr14:25784164-25784644 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 137 |
| Conread position: | 13-504 |
| Cow position: | chr14:3155878-3156369 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 134 |
| Conread position: | 13-524 |
| Cow position: | chr14:25783408-25783919 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 145 |
| Conread position: | 13-544 |
| Cow position: | chr14:25859584-25860115 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 146 |
| Conread position: | 13-555 |
| Cow position: | chr14:25783744-25784285 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 134 |
| Conread position: | 13-555 |
| Cow position: | chr14:25876971-25877512 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 250 |
| Conread position: | 13-570 |
| Cow position: | chr14:25783324-25783880 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 13-570 |
| Cow position: | chr14:25783576-25784133 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 553, 525 |
| Conread position: | 13-571 |
| Cow position: | chr14:25794950-25794394 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 136 |
| Conread position: | 13-571 |
| Cow position: | chr14:25835943-25836500 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 499 |
| Conread position: | 13-575 |
| Cow position: | chr14:25783996-25784558 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 137 |
| Conread position: | 14-293 |
| Cow position: | chr14:3155558-3155837 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 14-303 |
| Cow position: | chr14:25896103-25896392 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-409 |
| Cow position: | chr14:25910896-25911291 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 254, 225 |
| Conread position: | 14-423 |
| Cow position: | chr14:25896019-25896426 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 14-442 |
| Cow position: | chr14:447822-448250 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 14-448 |
| Cow position: | chr14:3127705-3127271 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 14-456 |
| Cow position: | chr14:25860341-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 158, 144 |
| Conread position: | 14-471 |
| Cow position: | chr14:25894846-25895300 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 155, 72 |
| Conread position: | 14-480 |
| Cow position: | chr14:447570-448036 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 14-480 |
| Cow position: | chr14:447654-448120 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 14-481 |
| Cow position: | chr14:3080781-3080314 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 313, 326 |
| Conread position: | 14-485 |
| Cow position: | chr14:25877392-25877866 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 144 |
| Conread position: | 14-487 |
| Cow position: | chr14:680792-681265 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 14-491 |
| Cow position: | chr14:3101438-3100964 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 14-492 |
| Cow position: | chr14:25795033-25794555 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 135 |
| Conread position: | 14-524 |
| Cow position: | chr14:433875-434385 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 313, 318 |
| Conread position: | 14-533 |
| Cow position: | chr14:3080529-3080010 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-534 |
| Cow position: | chr14:3080361-3079841 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 14-534 |
| Cow position: | chr14:3155963-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 416 |
| Conread position: | 14-543 |
| Cow position: | chr14:3080277-3079748 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 332 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 14-543 |
| Cow position: | chr14:25876384-25876913 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 172 |
| Conread position: | 14-543 |
| Cow position: | chr14:25877140-25877669 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 14-544 |
| Cow position: | chr14:3100938-3100410 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 201, 57 |
| Conread position: | 14-544 |
| Cow position: | chr14:25836448-25836978 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 509, 517 |
| Conread position: | 14-544 |
| Cow position: | chr14:25895599-25896129 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 324, 334 |
| Conread position: | 14-547 |
| Cow position: | chr14:3080949-3080418 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 169 |
| Conread position: | 14-547 |
| Cow position: | chr14:3127873-3127342 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 397 |
| Conread position: | 14-547 |
| Cow position: | chr14:25859921-25860452 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 14-547 |
| Cow position: | chr14:25876888-25877419 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 14-548 |
| Cow position: | chr14:680372-680904 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 255, 262 |
| Conread position: | 14-553 |
| Cow position: | chr14:25895767-25896305 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 334 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 14-555 |
| Cow position: | chr14:3080613-3080073 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 14-571 |
| Cow position: | chr14:25795453-25794897 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 133 |
| Conread position: | 14-571 |
| Cow position: | chr14:25836616-25837173 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 229 |
| Conread position: | 14-575 |
| Cow position: | chr14:3128125-3127564 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 15-452 |
| Cow position: | chr14:3100771-3100336 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 239, 228 |
| Conread position: | 18-533 |
| Cow position: | chr14:3100852-3100337 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 20-481 |
| Cow position: | chr14:25860263-25860724 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 331 |
| Conread position: | 20-481 |
| Cow position: | chr14:25877314-25877775 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 331 |
| Conread position: | 23-462 |
| Cow position: | chr14:3127780-3127341 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 26-288 |
| Cow position: | chr14:25836964-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 26-491 |
| Cow position: | chr14:25876564-25877030 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 26-534 |
| Cow position: | chr14:680468-680976 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 26-534 |
| Cow position: | chr14:3080181-3079673 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 311 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-544 |
| Cow position: | chr14:680636-681154 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 388 |
| Conread position: | 26-544 |
| Cow position: | chr14:25895359-25895877 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 462, 480 |
| Conread position: | 26-553 |
| Cow position: | chr14:25836544-25837070 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 322 |
| Conread position: | 26-553 |
| Cow position: | chr14:25877068-25877594 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 155 |
| Conread position: | 26-555 |
| Cow position: | chr14:25876228-25876756 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 26-555 |
| Cow position: | chr14:25895443-25895971 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 26-556 |
| Cow position: | chr14:25910744-25911269 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 26-572 |
| Cow position: | chr14:25859177-25859723 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 27-206 |
| Cow position: | chr14:3156555-3156734 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 141, 126 |
| Conread position: | 32-481 |
| Cow position: | chr14:433809-434258 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 379, 383 |
| Conread position: | 32-481 |
| Cow position: | chr14:3061742-3061293 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 146, 159 |
| Conread position: | 32-547 |
| Cow position: | chr14:3080847-3080334 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 34-471 |
| Cow position: | chr14:25836048-25836485 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-543 |
| Cow position: | chr14:25860110-25860618 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 36-555 |
| Cow position: | chr14:25876490-25877008 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 315 |
| Conread position: | 37-505 |
| Cow position: | chr14:3081012-3080542 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 56-571 |
| Cow position: | chr14:25876342-25876857 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 470, 475 |
| Conread position: | 81-547 |
| Cow position: | chr14:447553-448017 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 83-480 |
| Cow position: | chr14:25894831-25895225 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 97-394 |
| Cow position: | chr14:420625-420918 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 223, 11 |
| Conread position: | 101-547 |
| Cow position: | chr14:3081031-3080586 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 106-570 |
| Cow position: | chr14:25859173-25859637 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 108-542 |
| Cow position: | chr14:680214-680648 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 145 |
| Conread position: | 109-571 |
| Cow position: | chr14:25910743-25911201 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 110-480 |
| Cow position: | chr14:3061328-3060958 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 367, 363 |
| Conread position: | 116-456 |
| Cow position: | chr14:3061742-3061402 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 116-543 |
| Cow position: | chr14:3155408-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-534 |
| Cow position: | chr14:3155900-3156315 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 201, 211 |
| Conread position: | 182-481 |
| Cow position: | chr14:25894846-25895142 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 194-477 |
| Cow position: | chr14:420636-420917 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 155 |
| Conread position: | 287-547 |
| Cow position: | chr14:3155900-3156158 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 40 |
Show alignments to all cow chromosomes.