Cow genome map
Conread name: | Ss1.1-rpliv0106_m24.5 |
Conread position: | 1-544 |
Cow position: | chr2:78754727-78755258 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 74 |
Conread position: | 1-569 |
Cow position: | chr2:78754397-78754947 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 46 |
Conread position: | 1-571 |
Cow position: | chr2:78754967-78755534 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 68 |
Conread position: | 1-571 |
Cow position: | chr2:78755719-78756290 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 149 |
Conread position: | 2-395 |
Cow position: | chr2:82800166-82800553 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 255 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 325, 282 |
Conread position: | 2-472 |
Cow position: | chr2:86465402-86465872 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 299 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 80, 61 |
Conread position: | 2-543 |
Cow position: | chr2:82799662-82800203 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-544 |
Cow position: | chr2:82799746-82800288 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 237 |
Conread position: | 2-571 |
Cow position: | chr2:82799578-82800147 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 517, 504 |
Conread position: | 3-420 |
Cow position: | chr2:86465823-86466238 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 258 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 79, 71 |
Conread position: | 3-510 |
Cow position: | chr2:78754315-78754816 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 126 |
Conread position: | 3-543 |
Cow position: | chr2:78755555-78756094 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 112 |
Conread position: | 3-544 |
Cow position: | chr2:78755889-78756427 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 225 |
Conread position: | 3-571 |
Cow position: | chr2:78754649-78755201 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 41 |
Conread position: | 3-571 |
Cow position: | chr2:78755388-78755953 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 125 |
Conread position: | 3-575 |
Cow position: | chr2:78754885-78755455 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 228 |
Conread position: | 4-315 |
Cow position: | chr2:5874456-5874145 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 193 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 6, 10 |
Conread position: | 4-408 |
Cow position: | chr2:86465236-86465640 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 256 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 7, 17 |
Conread position: | 4-481 |
Cow position: | chr2:5874624-5874147 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 308 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 6, 10 |
Conread position: | 4-543 |
Cow position: | chr2:5875044-5874505 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 85 |
Conread position: | 5-278 |
Cow position: | chr2:5874371-5874100 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 179 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 75 |
Conread position: | 9-543 |
Cow position: | chr2:5874702-5874169 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 5 |
Conread position: | 13-325 |
Cow position: | chr2:48689478-48689167 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 201 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 13-536 |
Cow position: | chr2:78754811-78755334 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 221 |
Conread position: | 13-547 |
Cow position: | chr2:5874783-5874251 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 328 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 154, 169 |
Conread position: | 13-547 |
Cow position: | chr2:5875119-5874587 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 325 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 238, 242 |
Conread position: | 13-548 |
Cow position: | chr2:86465331-86465864 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 334 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 60, 16 |
Conread position: | 14-450 |
Cow position: | chr2:82800010-82800446 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-547 |
Cow position: | chr2:82799506-82800037 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 141 |
Conread position: | 14-555 |
Cow position: | chr2:82799842-82800382 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 71 |
Conread position: | 15-533 |
Cow position: | chr2:78754243-78754755 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 138 |
Conread position: | 19-492 |
Cow position: | chr2:86465671-86466144 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 274 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 422, 418 |
Conread position: | 20-547 |
Cow position: | chr2:86465589-86466113 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 322 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 76, 6 |
Conread position: | 26-409 |
Cow position: | chr2:86465762-86466145 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 240 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 153, 166 |
Conread position: | 26-537 |
Cow position: | chr2:82799938-82800449 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 301 |
Conread position: | 26-575 |
Cow position: | chr2:78754170-78754716 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 133 |
Conread position: | 34-403 |
Cow position: | chr2:48689541-48689173 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 223 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 38-544 |
Cow position: | chr2:78754101-78754602 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 66 |
Conread position: | 45-480 |
Cow position: | chr2:82799453-82799888 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 114 |
Conread position: | 45-548 |
Cow position: | chr2:86465109-86465612 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 315 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 118, 108 |
Conread position: | 56-481 |
Cow position: | chr2:5875160-5874735 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 278 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 20, 29 |
Conread position: | 95-542 |
Cow position: | chr2:86464988-86465436 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 275 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 11, 151 |
Conread position: | 98-492 |
Cow position: | chr2:86465078-86465472 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 18, 32 |
Conread position: | 147-555 |
Cow position: | chr2:82799470-82799878 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 94 |
Conread position: | 204-543 |
Cow position: | chr2:5875180-5874841 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 218 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 114, 128 |
Conread position: | 217-545 |
Cow position: | chr2:82799457-82799783 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 222 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 30, 16 |
Show alignments to all cow chromosomes.