Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               2-532
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-543
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               74, 86
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 12
               

               Conread position:
               3-543
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               328
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               167, 180
               

               Conread position:
               4-448
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               4-461
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 97
               

               Conread position:
               5-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 233
               

               Conread position:
               14-464
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               303, 317
               

               Conread position:
               14-480
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               412, 408
               

               Conread position:
               14-481
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 171
               

               Conread position:
               14-532
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               14-543
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               321
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               14-543
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 77
               

               Conread position:
               14-549
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               324
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               20-534
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               32-543
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               318
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               146, 151
               

               Conread position:
               34-548
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               310
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               50-539
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               94-542
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 84
               

               Conread position:
               101-480
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-543
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               185-543
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 49
               
Show alignments to all cow chromosomes.