Cow genome map
| Conread name: | Ss1.1-rpliv0106_m24.5 |
| Conread position: | 2-532 |
| Cow position: | chr21:12608626-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-543 |
| Cow position: | chr21:12658884-12659425 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 330 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 3-464 |
| Cow position: | chr21:12659305-12659766 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 3-543 |
| Cow position: | chr21:12659053-12659593 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 167, 180 |
| Conread position: | 4-448 |
| Cow position: | chr21:12659558-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 4-461 |
| Cow position: | chr21:34222998-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 97 |
| Conread position: | 5-486 |
| Cow position: | chr21:12608875-12608394 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 233 |
| Conread position: | 14-464 |
| Cow position: | chr21:12658980-12659430 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 282 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 303, 317 |
| Conread position: | 14-480 |
| Cow position: | chr21:12659400-12659866 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 412, 408 |
| Conread position: | 14-481 |
| Cow position: | chr21:34223072-34222605 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 171 |
| Conread position: | 14-532 |
| Cow position: | chr21:12608446-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 14-543 |
| Cow position: | chr21:12659232-12659761 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 14-543 |
| Cow position: | chr21:34223153-34222627 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 14-549 |
| Cow position: | chr21:12608530-12607995 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 324 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 20-534 |
| Cow position: | chr21:12608776-12608262 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 32-543 |
| Cow position: | chr21:12658830-12659341 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 146, 151 |
| Conread position: | 34-548 |
| Cow position: | chr21:12659504-12660016 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 50-539 |
| Cow position: | chr21:12608914-12608425 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 94-542 |
| Cow position: | chr21:34223157-34222712 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 84 |
| Conread position: | 101-480 |
| Cow position: | chr21:12658815-12659194 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-543 |
| Cow position: | chr21:12608914-12608505 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-543 |
| Cow position: | chr21:12658815-12659173 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 49 |
Show alignments to all cow chromosomes.