Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               3-525
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 235
               

               Conread position:
               3-555
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 235
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-534
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 178
               

               Conread position:
               12-544
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 141
               

               Conread position:
               12-547
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               13-431
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 169
               

               Conread position:
               13-544
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 226
               

               Conread position:
               13-544
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 145
               

               Conread position:
               13-544
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 225
               

               Conread position:
               13-544
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 226
               

               Conread position:
               13-551
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 146
               

               Conread position:
               13-555
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               13-571
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               13-575
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 146
               

               Conread position:
               14-309
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               156, 169
               

               Conread position:
               14-492
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               14-551
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 144
               

               Conread position:
               14-570
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 219
               

               Conread position:
               14-571
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               552, 529
               

               Conread position:
               33-544
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               370, 358
               

               Conread position:
               36-397
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               38-263
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 109
               

               Conread position:
               48-574
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               59-551
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 179
               

               Conread position:
               97-570
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               17, 453
               

               Conread position:
               102-487
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               376, 360
               

               Conread position:
               117-342
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 114
               

               Conread position:
               183-555
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               186-555
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               354, 0
               

               Conread position:
               218-421
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.