Cow genome map
| Conread name: | Ss1.1-rpliv0106_m24.5 |
| Conread position: | 3-525 |
| Cow position: | chr24:17035486-17034964 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 235 |
| Conread position: | 3-555 |
| Cow position: | chr24:17035654-17035103 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 235 |
| Conread position: | 4-215 |
| Cow position: | chr24:17070848-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-534 |
| Cow position: | chr24:17078040-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 178 |
| Conread position: | 12-544 |
| Cow position: | chr24:17036065-17035533 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 141 |
| Conread position: | 12-547 |
| Cow position: | chr24:17036317-17035784 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 13-431 |
| Cow position: | chr24:17077863-17077446 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 169 |
| Conread position: | 13-544 |
| Cow position: | chr24:17035560-17035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 226 |
| Conread position: | 13-544 |
| Cow position: | chr24:17035728-17035197 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 145 |
| Conread position: | 13-544 |
| Cow position: | chr24:17036148-17035617 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 225 |
| Conread position: | 13-544 |
| Cow position: | chr24:17036400-17035869 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 226 |
| Conread position: | 13-551 |
| Cow position: | chr24:17035980-17035443 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 146 |
| Conread position: | 13-555 |
| Cow position: | chr24:17070437-17070978 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 13-571 |
| Cow position: | chr24:17036232-17035674 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 13-575 |
| Cow position: | chr24:17070521-17071087 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 146 |
| Conread position: | 14-309 |
| Cow position: | chr24:17013227-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 156, 169 |
| Conread position: | 14-492 |
| Cow position: | chr24:17078114-17077636 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 14-551 |
| Cow position: | chr24:17035895-17035359 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 144 |
| Conread position: | 14-570 |
| Cow position: | chr24:17035811-17035255 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 219 |
| Conread position: | 14-571 |
| Cow position: | chr24:17036483-17035926 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 552, 529 |
| Conread position: | 33-544 |
| Cow position: | chr24:17036548-17036037 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 358 |
| Conread position: | 36-397 |
| Cow position: | chr24:17013165-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 132, 117 |
| Conread position: | 38-263 |
| Cow position: | chr24:16986433-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 109 |
| Conread position: | 48-574 |
| Cow position: | chr24:17070388-17070913 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 59-551 |
| Cow position: | chr24:17078153-17077662 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 179 |
| Conread position: | 97-570 |
| Cow position: | chr24:17070352-17070826 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 298 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 17, 453 |
| Conread position: | 102-487 |
| Cow position: | chr24:17013147-17013533 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 360 |
| Conread position: | 117-342 |
| Cow position: | chr24:16986428-16986653 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 136, 114 |
| Conread position: | 183-555 |
| Cow position: | chr24:17078365-17077994 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 186-555 |
| Cow position: | chr24:17013147-17013514 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 218-421 |
| Cow position: | chr24:16986445-16986648 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.