Cow genome map
| Conread name: | Ss1.1-rpliv0106_m24.5 |
| Conread position: | 1-274 |
| Cow position: | chr25:33157003-33156731 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 1-365 |
| Cow position: | chr25:34763380-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-408 |
| Cow position: | chr25:23420433-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-480 |
| Cow position: | chr25:34732306-34731827 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 1-481 |
| Cow position: | chr25:34447324-34447797 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 153 |
| Conread position: | 1-493 |
| Cow position: | chr25:33157339-33156847 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 345 |
| Conread position: | 1-506 |
| Cow position: | chr25:33305352-33304853 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 1-543 |
| Cow position: | chr25:33298781-33299323 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 1-544 |
| Cow position: | chr25:34447156-34447699 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 233 |
| Conread position: | 1-555 |
| Cow position: | chr25:36800933-36801474 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 233 |
| Conread position: | 1-571 |
| Cow position: | chr25:36801341-36801911 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 169 |
| Conread position: | 1-575 |
| Cow position: | chr25:33298865-33299439 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 565, 542 |
| Conread position: | 2-291 |
| Cow position: | chr25:326974-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 2-295 |
| Cow position: | chr25:4657414-4657121 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 2-486 |
| Cow position: | chr25:36800850-36801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 328 |
| Conread position: | 2-492 |
| Cow position: | chr25:34732473-34731982 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 2-544 |
| Cow position: | chr25:326548-327096 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 176, 181 |
| Conread position: | 3-234 |
| Cow position: | chr25:36801763-36801990 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 173, 179 |
| Conread position: | 3-297 |
| Cow position: | chr25:346500-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 134, 140 |
| Conread position: | 3-373 |
| Cow position: | chr25:33127854-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 227 |
| Conread position: | 3-409 |
| Cow position: | chr25:25652576-25652982 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 3-480 |
| Cow position: | chr25:25652492-25652969 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 166, 180 |
| Conread position: | 3-538 |
| Cow position: | chr25:34763214-34763744 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 86 |
| Conread position: | 3-543 |
| Cow position: | chr25:33299287-33299827 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 78 |
| Conread position: | 3-544 |
| Cow position: | chr25:33305746-33305230 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 26 |
| Conread position: | 3-546 |
| Cow position: | chr25:33144901-33145443 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 3-560 |
| Cow position: | chr25:33157505-33156950 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 329 |
| Conread position: | 3-571 |
| Cow position: | chr25:33157421-33156853 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 3-571 |
| Cow position: | chr25:34769820-34769252 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 235 |
| Conread position: | 3-575 |
| Cow position: | chr25:33298531-33299103 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 431 |
| Conread position: | 4-342 |
| Cow position: | chr25:414643-414308 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 4-449 |
| Cow position: | chr25:34763299-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 4-543 |
| Cow position: | chr25:36800768-36801307 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-571 |
| Cow position: | chr25:33298700-33299266 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 4-571 |
| Cow position: | chr25:33299204-33299771 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 557, 539 |
| Conread position: | 4-575 |
| Cow position: | chr25:33299036-33299607 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 562, 539 |
| Conread position: | 5-276 |
| Cow position: | chr25:34769482-34769212 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 5-338 |
| Cow position: | chr25:18642201-18641865 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 5-344 |
| Cow position: | chr25:36801681-36802013 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 5-498 |
| Cow position: | chr25:33157251-33156758 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 5-571 |
| Cow position: | chr25:33299121-33299686 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 324 |
| Conread position: | 7-472 |
| Cow position: | chr25:36801515-36801976 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 0 |
| Conread position: | 7-575 |
| Cow position: | chr25:33306576-33306011 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 9-555 |
| Cow position: | chr25:326474-327022 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 8 |
| Conread position: | 12-543 |
| Cow position: | chr25:36800608-36801139 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-571 |
| Cow position: | chr25:34770063-34769505 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 422 |
| Conread position: | 12-571 |
| Cow position: | chr25:36800692-36801250 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 13-325 |
| Cow position: | chr25:22235891-22236203 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 13-338 |
| Cow position: | chr25:34769558-34769233 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-386 |
| Cow position: | chr25:34447504-34447870 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 365, 202 |
| Conread position: | 13-452 |
| Cow position: | chr25:34714096-34714535 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 240, 218 |
| Conread position: | 13-480 |
| Cow position: | chr25:25652418-25652885 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 13-492 |
| Cow position: | chr25:34769726-34769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 220 |
| Conread position: | 13-543 |
| Cow position: | chr25:34763059-34763583 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-547 |
| Cow position: | chr25:34762891-34763420 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 13-549 |
| Cow position: | chr25:34447252-34447781 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 13-555 |
| Cow position: | chr25:34769894-34769353 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 530, 0 |
| Conread position: | 13-570 |
| Cow position: | chr25:34770146-34769589 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 14-195 |
| Cow position: | chr25:23420698-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 14-363 |
| Cow position: | chr25:366704-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 158, 178 |
| Conread position: | 14-410 |
| Cow position: | chr25:25652923-25653319 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-443 |
| Cow position: | chr25:326392-326821 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 310 |
| Conread position: | 14-456 |
| Cow position: | chr25:33127781-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-462 |
| Cow position: | chr25:34433587-34434029 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 183, 20 |
| Conread position: | 14-532 |
| Cow position: | chr25:3663994-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-532 |
| Cow position: | chr25:25652335-25652853 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 14-543 |
| Cow position: | chr25:25652251-25652780 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 410, 403 |
| Conread position: | 14-544 |
| Cow position: | chr25:326728-327264 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 319 |
| Conread position: | 14-555 |
| Cow position: | chr25:33306156-33305619 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 14-555 |
| Cow position: | chr25:34732545-34732005 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 303, 320 |
| Conread position: | 14-555 |
| Cow position: | chr25:34763141-34763678 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 332 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 474, 313 |
| Conread position: | 14-569 |
| Cow position: | chr25:34769977-34769424 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 224 |
| Conread position: | 14-570 |
| Cow position: | chr25:34447001-34447557 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 552, 526 |
| Conread position: | 14-571 |
| Cow position: | chr25:33298626-33299183 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 14-571 |
| Cow position: | chr25:33298962-33299519 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 418 |
| Conread position: | 14-571 |
| Cow position: | chr25:34447085-34447642 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 459 |
| Conread position: | 14-571 |
| Cow position: | chr25:34713845-34714402 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 233, 219 |
| Conread position: | 14-575 |
| Cow position: | chr25:33305421-33304868 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 15 |
| Conread position: | 14-575 |
| Cow position: | chr25:36800526-36801087 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 17-575 |
| Cow position: | chr25:33306396-33305844 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 53 |
| Conread position: | 18-235 |
| Cow position: | chr25:34433003-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-381 |
| Cow position: | chr25:346431-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 150, 140 |
| Conread position: | 22-240 |
| Cow position: | chr25:346603-346821 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 26-544 |
| Cow position: | chr25:33298470-33298988 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 26-570 |
| Cow position: | chr25:33305971-33305434 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 490, 26 |
| Conread position: | 26-571 |
| Cow position: | chr25:23420055-23420583 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 29-415 |
| Cow position: | chr25:34732614-34732228 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 144, 135 |
| Conread position: | 29-515 |
| Cow position: | chr25:36844626-36844153 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 29-531 |
| Cow position: | chr25:23420377-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 29-543 |
| Cow position: | chr25:36801453-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 30-377 |
| Cow position: | chr25:326918-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 34-548 |
| Cow position: | chr25:22235828-22236340 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 390, 400 |
| Conread position: | 34-575 |
| Cow position: | chr25:36800462-36801003 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 527, 506 |
| Conread position: | 35-381 |
| Cow position: | chr25:34732104-34731757 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 140, 131 |
| Conread position: | 35-416 |
| Cow position: | chr25:414696-414318 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 35-543 |
| Cow position: | chr25:34762829-34763334 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 276, 295 |
| Conread position: | 35-572 |
| Cow position: | chr25:34446938-34447475 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 438 |
| Conread position: | 36-288 |
| Cow position: | chr25:427330-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 223, 229 |
| Conread position: | 36-543 |
| Cow position: | chr25:3663932-3664439 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 222, 218 |
| Conread position: | 38-492 |
| Cow position: | chr25:34714037-34714491 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-537 |
| Cow position: | chr25:33127725-33128221 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 494 |
| Conread position: | 46-319 |
| Cow position: | chr25:414763-414496 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 207, 11 |
| Conread position: | 56-542 |
| Cow position: | chr25:34446875-34447361 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 56-571 |
| Cow position: | chr25:23420320-23420835 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 59-540 |
| Cow position: | chr25:326353-326833 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 79-551 |
| Cow position: | chr25:34770164-34769693 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 83-574 |
| Cow position: | chr25:34713830-34714320 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 193, 186 |
| Conread position: | 83-575 |
| Cow position: | chr25:36801339-36801831 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 447 |
| Conread position: | 97-369 |
| Cow position: | chr25:427307-427580 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 221, 233 |
| Conread position: | 103-571 |
| Cow position: | chr25:33144833-33145298 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 107-492 |
| Cow position: | chr25:22235817-22236202 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 109-538 |
| Cow position: | chr25:33127708-33128140 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 0 |
| Conread position: | 112-523 |
| Cow position: | chr25:34732615-34732204 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 144, 136 |
| Conread position: | 113-548 |
| Cow position: | chr25:36844626-36844202 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 118-443 |
| Cow position: | chr25:366724-367049 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 118-456 |
| Cow position: | chr25:346447-346785 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 118-543 |
| Cow position: | chr25:34762828-34763250 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 141, 125 |
| Conread position: | 119-543 |
| Cow position: | chr25:25652188-25652612 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 203, 213 |
| Conread position: | 120-461 |
| Cow position: | chr25:326924-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 177-441 |
| Cow position: | chr25:427304-427567 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 5 |
| Conread position: | 198-536 |
| Cow position: | chr25:346443-346781 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 122, 134 |
| Conread position: | 203-407 |
| Cow position: | chr25:34433020-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 203-531 |
| Cow position: | chr25:366725-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 117, 129 |
| Conread position: | 217-571 |
| Cow position: | chr25:33127732-33128085 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 323 |
| Conread position: | 251-555 |
| Cow position: | chr25:18642207-18641901 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 138, 290 |
| Conread position: | 266-571 |
| Cow position: | chr25:366704-367008 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 207, 213 |
| Conread position: | 270-571 |
| Cow position: | chr25:346431-346732 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 203, 209 |
| Conread position: | 275-571 |
| Cow position: | chr25:33298467-33298763 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 287-487 |
| Cow position: | chr25:34433020-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 139, 146 |
| Conread position: | 290-555 |
| Cow position: | chr25:33127721-33127985 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 371-555 |
| Cow position: | chr25:34433020-34433203 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 61 |
Show alignments to all cow chromosomes.