Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               244, 230
               

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 232
               

               Conread position:
               1-559
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 157
               

               Conread position:
               2-555
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 232
               

               Conread position:
               2-555
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 232
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-505
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               389, 143
               

               Conread position:
               3-547
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 150
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               4-571
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               4-571
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               13-405
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               153, 141
               

               Conread position:
               13-471
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               13-480
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               299
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               308, 41
               

               Conread position:
               13-560
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 217
               

               Conread position:
               13-575
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               351
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               14-458
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               14-533
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               14-571
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 73
               

               Conread position:
               25-571
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 6
               

               Conread position:
               27-571
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               37-571
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               56-504
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               80-547
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 151
               

               Conread position:
               80-561
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               247, 256
               

               Conread position:
               98-555
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               108-532
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 20
               
Show alignments to all cow chromosomes.