Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               5-409
               

               Cow position:
               chr4:42315316-42314914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               5-571
               

               Cow position:
               chr4:42315066-42314501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 234
               

               Conread position:
               12-481
               

               Cow position:
               chr4:42314556-42314087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               13-571
               

               Cow position:
               chr4:42314219-42313667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               346
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               195, 163
               

               Conread position:
               20-493
               

               Cow position:
               chr4:42314128-42313660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               310
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               22-412
               

               Cow position:
               chr4:42314042-42313658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 118
               

               Conread position:
               97-492
               

               Cow position:
               chr4:42314806-42314412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 91
               

               Conread position:
               119-493
               

               Cow position:
               chr4:42315370-42314998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 52
               
Show alignments to all cow chromosomes.