Cow genome map


           Conread name:
           Ss1.1-rpliv0106_m24.5
        

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               338, 350
               

               Conread position:
               2-427
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               3-543
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               4-222
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 77
               

               Conread position:
               5-478
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               157, 145
               

               Conread position:
               5-480
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               296
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               176, 171
               

               Conread position:
               11-325
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 223
               

               Conread position:
               11-547
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               11-555
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               515, 520
               

               Conread position:
               12-572
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               13-492
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               470, 0
               

               Conread position:
               13-571
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               13-572
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 218
               

               Conread position:
               14-482
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               241, 253
               

               Conread position:
               14-544
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-553
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               165, 60
               

               Conread position:
               14-555
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 37
               

               Conread position:
               14-571
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               19-574
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               521, 0
               

               Conread position:
               26-486
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               26-543
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               26-547
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               308, 325
               

               Conread position:
               26-547
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               301
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               143, 157
               

               Conread position:
               31-547
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               32-480
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 57
               
Show alignments to all cow chromosomes.