Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 35-279 |
| Cow position: | chr10:7232162-7232418 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 250 |
| Conread position: | 41-267 |
| Cow position: | chr10:57296129-57296364 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 41-339 |
| Cow position: | chr10:18389901-18390215 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 154 |
| Conread position: | 42-263 |
| Cow position: | chr10:59519328-59519097 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 188 |
| Conread position: | 42-273 |
| Cow position: | chr10:56337457-56337219 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 42-273 |
| Cow position: | chr10:67450371-67450614 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 188 |
| Conread position: | 42-297 |
| Cow position: | chr10:27094751-27095026 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 43-268 |
| Cow position: | chr10:1434670-1434440 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 125 |
| Conread position: | 43-269 |
| Cow position: | chr10:6542021-6541782 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 199 |
| Conread position: | 46-253 |
| Cow position: | chr10:44259393-44259608 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 51-274 |
| Cow position: | chr10:24625272-24625507 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 51-277 |
| Cow position: | chr10:41020252-41020023 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 224 |
| Conread position: | 53-239 |
| Cow position: | chr10:30553634-30553439 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 53-274 |
| Cow position: | chr10:25579699-25579930 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 53-274 |
| Cow position: | chr10:48824078-48823844 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 232 |
| Conread position: | 53-274 |
| Cow position: | chr10:52142802-52142574 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 53-275 |
| Cow position: | chr10:24936013-24936246 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 230 |
| Conread position: | 53-339 |
| Cow position: | chr10:10686814-10686520 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 224 |
| Conread position: | 65-281 |
| Cow position: | chr10:34561330-34561564 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 66-274 |
| Cow position: | chr10:316682-316899 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 68-268 |
| Cow position: | chr10:2231390-2231601 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 68-270 |
| Cow position: | chr10:6905805-6905598 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 138 |
Show alignments to all cow chromosomes.