Cow genome map


           Conread name:
           Ss1.1-rpliv0118_i2.5
        

               Conread position:
               39-262
               

               Cow position:
               chr12:19972217-19971989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               42-255
               

               Cow position:
               chr12:4011212-4010986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               53-262
               

               Cow position:
               chr12:10638146-10637940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 153
               

               Conread position:
               53-274
               

               Cow position:
               chr12:35303184-35302957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 160
               

               Conread position:
               59-269
               

               Cow position:
               chr12:42557615-42557838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               61-269
               

               Cow position:
               chr12:36572621-36572840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 152
               
Show alignments to all cow chromosomes.