Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 34-281 |
| Cow position: | chr13:53713166-53712910 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 34-298 |
| Cow position: | chr13:4668369-4668089 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 250 |
| Conread position: | 40-276 |
| Cow position: | chr13:14182687-14182933 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 40-279 |
| Cow position: | chr13:27540370-27540120 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 41-269 |
| Cow position: | chr13:19289986-19290222 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 41-286 |
| Cow position: | chr13:37544399-37544154 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 42-217 |
| Cow position: | chr13:57767923-57767739 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 43-238 |
| Cow position: | chr13:53050799-53051007 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 43-275 |
| Cow position: | chr13:52776199-52776432 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 92, 184 |
| Conread position: | 45-259 |
| Cow position: | chr13:18945272-18945500 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 45-274 |
| Cow position: | chr13:51441085-51441322 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 54-281 |
| Cow position: | chr13:14552389-14552614 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 59-274 |
| Cow position: | chr13:61072147-61072376 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 65-294 |
| Cow position: | chr13:37166333-37166572 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 70-274 |
| Cow position: | chr13:58287454-58287661 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 74-275 |
| Cow position: | chr13:16671521-16671317 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 36 |
Show alignments to all cow chromosomes.