Cow genome map


           Conread name:
           Ss1.1-rpliv0118_i2.5
        

               Conread position:
               35-242
               

               Cow position:
               chr15:23937261-23937473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               40-269
               

               Cow position:
               chr15:9438728-9438494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               41-274
               

               Cow position:
               chr15:20155044-20155289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               42-263
               

               Cow position:
               chr15:9735588-9735823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               42-275
               

               Cow position:
               chr15:38750395-38750151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               42-277
               

               Cow position:
               chr15:9122218-9121979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               44-262
               

               Cow position:
               chr15:33718381-33718162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               44-269
               

               Cow position:
               chr15:23274465-23274690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 143
               

               Conread position:
               47-277
               

               Cow position:
               chr15:50870584-50870345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               53-274
               

               Cow position:
               chr15:5040538-5040313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 223
               

               Conread position:
               57-280
               

               Cow position:
               chr15:16925581-16925814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 161
               

               Conread position:
               70-276
               

               Cow position:
               chr15:34956039-34955824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 28
               
Show alignments to all cow chromosomes.