Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 42-232 |
| Cow position: | chr16:15975483-15975684 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 42-260 |
| Cow position: | chr16:44219394-44219174 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 42-263 |
| Cow position: | chr16:6647906-6647666 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 42-274 |
| Cow position: | chr16:24801842-24801603 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 43-272 |
| Cow position: | chr16:25893297-25893055 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 43-316 |
| Cow position: | chr16:44704403-44704118 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 44-267 |
| Cow position: | chr16:12018547-12018318 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 44-268 |
| Cow position: | chr16:7648825-7648596 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 45-262 |
| Cow position: | chr16:49388072-49387845 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 58-274 |
| Cow position: | chr16:48631007-48630785 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 63-268 |
| Cow position: | chr16:54296409-54296194 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 205 |
| Conread position: | 75-269 |
| Cow position: | chr16:38531933-38532138 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 142 |
| Conread position: | 76-312 |
| Cow position: | chr16:11310098-11309850 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 87-286 |
| Cow position: | chr16:5163911-5164122 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 107 |
Show alignments to all cow chromosomes.