Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 35-275 |
| Cow position: | chr17:21860452-21860706 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 40-274 |
| Cow position: | chr17:40282361-40282115 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 41-274 |
| Cow position: | chr17:12132659-12132904 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 154 |
| Conread position: | 41-275 |
| Cow position: | chr17:29128992-29129234 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 41-280 |
| Cow position: | chr17:43498423-43498666 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 41-317 |
| Cow position: | chr17:3549915-3550202 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 42-253 |
| Cow position: | chr17:9753135-9752916 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 42-297 |
| Cow position: | chr17:19133470-19133733 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 234 |
| Conread position: | 43-274 |
| Cow position: | chr17:37701297-37701059 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 43-281 |
| Cow position: | chr17:35018691-35018445 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 46-312 |
| Cow position: | chr17:17133677-17133406 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 51-280 |
| Cow position: | chr17:45793979-45793751 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 53-269 |
| Cow position: | chr17:42663232-42663459 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 53-292 |
| Cow position: | chr17:29355716-29355966 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 58-269 |
| Cow position: | chr17:32407350-32407575 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 65-267 |
| Cow position: | chr17:42382730-42382943 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 135-269 |
| Cow position: | chr17:4303642-4303500 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 85 |
Show alignments to all cow chromosomes.