Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 34-277 |
| Cow position: | chr18:15485620-15485877 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 214 |
| Conread position: | 35-280 |
| Cow position: | chr18:51331417-51331168 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 135 |
| Conread position: | 39-336 |
| Cow position: | chr18:15859955-15859646 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 40-260 |
| Cow position: | chr18:37492365-37492134 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 40-274 |
| Cow position: | chr18:12249255-12249013 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 41-268 |
| Cow position: | chr18:40078603-40078835 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 42-274 |
| Cow position: | chr18:18854998-18854754 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 42-298 |
| Cow position: | chr18:51309473-51309204 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 178 |
| Conread position: | 45-274 |
| Cow position: | chr18:902598-902357 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 52-311 |
| Cow position: | chr18:28268364-28268634 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 59-262 |
| Cow position: | chr18:21797649-21797432 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 63-274 |
| Cow position: | chr18:39812089-39812310 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 218 |
| Conread position: | 96-274 |
| Cow position: | chr18:14761669-14761486 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 132-280 |
| Cow position: | chr18:13420448-13420300 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 76 |
Show alignments to all cow chromosomes.