Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 1-274 |
| Cow position: | chr2:43627963-43628242 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 40-260 |
| Cow position: | chr2:44616599-44616366 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 40-329 |
| Cow position: | chr2:1370109-1369801 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 19, 296 |
| Conread position: | 41-273 |
| Cow position: | chr2:33398432-33398664 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 41-274 |
| Cow position: | chr2:52653975-52653733 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 41-274 |
| Cow position: | chr2:78645162-78645399 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 41-275 |
| Cow position: | chr2:26032989-26032743 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 42-238 |
| Cow position: | chr2:56895490-56895692 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 149 |
| Conread position: | 42-277 |
| Cow position: | chr2:871227-871474 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 42-297 |
| Cow position: | chr2:301079-301346 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 42-373 |
| Cow position: | chr2:4672939-4673290 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 43-268 |
| Cow position: | chr2:76985460-76985692 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 184 |
| Conread position: | 43-274 |
| Cow position: | chr2:4935507-4935749 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 201 |
| Conread position: | 43-274 |
| Cow position: | chr2:16872092-16871850 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 44-254 |
| Cow position: | chr2:38593200-38593412 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 44-268 |
| Cow position: | chr2:431826-432066 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 44-274 |
| Cow position: | chr2:58978112-58977869 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 44-275 |
| Cow position: | chr2:22669658-22669891 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 44-275 |
| Cow position: | chr2:77067563-77067324 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 44-280 |
| Cow position: | chr2:2714944-2714711 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 115 |
| Conread position: | 46-273 |
| Cow position: | chr2:38561310-38561077 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 168 |
| Conread position: | 46-299 |
| Cow position: | chr2:852632-852902 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 53-269 |
| Cow position: | chr2:33091284-33091053 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 53-274 |
| Cow position: | chr2:42656719-42656488 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 53-274 |
| Cow position: | chr2:57699938-57699717 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 53-275 |
| Cow position: | chr2:33465071-33465301 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 54-274 |
| Cow position: | chr2:1957917-1957684 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 21 |
Show alignments to all cow chromosomes.