Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 35-275 |
| Cow position: | chr21:44092833-44093084 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 39-245 |
| Cow position: | chr21:4191948-4191731 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 40-257 |
| Cow position: | chr21:13199579-13199360 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 41-224 |
| Cow position: | chr21:46337709-46337517 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 41-265 |
| Cow position: | chr21:46292034-46291795 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 41-273 |
| Cow position: | chr21:38944573-38944816 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 41-274 |
| Cow position: | chr21:20236082-20236327 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 41-276 |
| Cow position: | chr21:78381-78625 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 41-312 |
| Cow position: | chr21:26479869-26480157 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 277 |
| Conread position: | 42-269 |
| Cow position: | chr21:4739285-4739049 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 42-286 |
| Cow position: | chr21:32829778-32830028 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 43-265 |
| Cow position: | chr21:9329404-9329648 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 44-274 |
| Cow position: | chr21:27033088-27032852 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 131 |
| Conread position: | 46-268 |
| Cow position: | chr21:34591840-34592065 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 149 |
| Conread position: | 50-268 |
| Cow position: | chr21:37191904-37192119 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 65-268 |
| Cow position: | chr21:33948937-33948720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.