Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 34-218 |
| Cow position: | chr25:14995754-14995946 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 34-271 |
| Cow position: | chr25:15005346-15005105 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 34-273 |
| Cow position: | chr25:34493882-34494128 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 35-273 |
| Cow position: | chr25:19107731-19107481 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 40-273 |
| Cow position: | chr25:24664012-24664259 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 41-275 |
| Cow position: | chr25:28242239-28242005 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 135 |
| Conread position: | 41-298 |
| Cow position: | chr25:747714-747460 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 42-260 |
| Cow position: | chr25:24636881-24637109 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 42-269 |
| Cow position: | chr25:22479714-22479956 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-273 |
| Cow position: | chr25:24084181-24084414 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 43-270 |
| Cow position: | chr25:569558-569790 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 44-273 |
| Cow position: | chr25:14618751-14618998 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 44-276 |
| Cow position: | chr25:17450426-17450666 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 52 |
| Conread position: | 44-280 |
| Cow position: | chr25:14012102-14011855 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 53 |
| Conread position: | 45-262 |
| Cow position: | chr25:13941475-13941709 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 46-276 |
| Cow position: | chr25:24056466-24056709 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 200 |
| Conread position: | 51-260 |
| Cow position: | chr25:33039233-33039450 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 58-262 |
| Cow position: | chr25:35295019-35295233 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 65-274 |
| Cow position: | chr25:9979588-9979811 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.