Cow genome map


           Conread name:
           Ss1.1-rpliv0118_i2.5
        

               Conread position:
               39-274
               

               Cow position:
               chr26:9837921-9838173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               41-266
               

               Cow position:
               chr26:7307502-7307268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               41-276
               

               Cow position:
               chr26:21579151-21578908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               42-248
               

               Cow position:
               chr26:10124630-10124846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 175
               

               Conread position:
               42-251
               

               Cow position:
               chr26:15516758-15516975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               42-274
               

               Cow position:
               chr26:27432219-27432462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 227
               

               Conread position:
               43-269
               

               Cow position:
               chr26:19013372-19013138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               43-274
               

               Cow position:
               chr26:26281303-26281060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               44-268
               

               Cow position:
               chr26:17538466-17538229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 11
               
Show alignments to all cow chromosomes.