Cow genome map


           Conread name:
           Ss1.1-rpliv0118_i2.5
        

               Conread position:
               42-274
               

               Cow position:
               chr4:45764780-45765017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               42-280
               

               Cow position:
               chr4:65345048-65345287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               43-273
               

               Cow position:
               chr4:25822812-25823054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               45-258
               

               Cow position:
               chr4:38932519-38932300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               45-265
               

               Cow position:
               chr4:21857141-21857368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               53-274
               

               Cow position:
               chr4:20658190-20658411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               71-274
               

               Cow position:
               chr4:26430427-26430223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 34
               
Show alignments to all cow chromosomes.