Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 35-274 |
| Cow position: | chr5:45837051-45837297 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 39-274 |
| Cow position: | chr5:22555428-22555189 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 40-269 |
| Cow position: | chr5:21185021-21185262 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 190 |
| Conread position: | 40-274 |
| Cow position: | chr5:57970061-57969819 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 40-275 |
| Cow position: | chr5:28037402-28037157 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 42-249 |
| Cow position: | chr5:33793185-33792969 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 42-274 |
| Cow position: | chr5:54397218-54397456 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 221 |
| Conread position: | 42-280 |
| Cow position: | chr5:37653624-37653383 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 178 |
| Conread position: | 43-275 |
| Cow position: | chr5:29661097-29661338 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 43-280 |
| Cow position: | chr5:70771458-70771210 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 44-269 |
| Cow position: | chr5:4328591-4328357 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 44-269 |
| Cow position: | chr5:22857326-22857563 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 192 |
| Conread position: | 45-270 |
| Cow position: | chr5:50201696-50201928 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 53-265 |
| Cow position: | chr5:62143662-62143889 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 53-305 |
| Cow position: | chr5:18899700-18899439 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 98-274 |
| Cow position: | chr5:51818828-51818642 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 7 |
Show alignments to all cow chromosomes.