Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 34-281 |
| Cow position: | chr6:61198409-61198151 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 35-267 |
| Cow position: | chr6:54377015-54376769 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 35-268 |
| Cow position: | chr6:39109905-39110146 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 40-264 |
| Cow position: | chr6:27942276-27942042 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 41-274 |
| Cow position: | chr6:30076827-30077081 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 42-269 |
| Cow position: | chr6:53773504-53773268 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 43-269 |
| Cow position: | chr6:35724831-35724593 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 105 |
| Conread position: | 43-274 |
| Cow position: | chr6:27342043-27341802 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 44-274 |
| Cow position: | chr6:15471367-15471609 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 165 |
| Conread position: | 47-298 |
| Cow position: | chr6:68826422-68826684 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 53-274 |
| Cow position: | chr6:62852998-62852772 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 220 |
| Conread position: | 53-293 |
| Cow position: | chr6:57395995-57395745 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 63-269 |
| Cow position: | chr6:68309106-68309324 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 64-351 |
| Cow position: | chr6:67098647-67098356 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 263 |
| Conread position: | 67-275 |
| Cow position: | chr6:6838995-6838787 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 85 |
Show alignments to all cow chromosomes.