Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 23-269 |
| Cow position: | chr8:55981039-55981294 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 34-243 |
| Cow position: | chr8:19868788-19868571 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 34-298 |
| Cow position: | chr8:25843070-25842796 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 35-274 |
| Cow position: | chr8:36957217-36957467 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 37-278 |
| Cow position: | chr8:42602941-42602690 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 245 |
| Conread position: | 39-274 |
| Cow position: | chr8:8224645-8224891 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 41-231 |
| Cow position: | chr8:40431798-40431990 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 41-281 |
| Cow position: | chr8:27822280-27822030 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 42-269 |
| Cow position: | chr8:13558988-13558750 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 43-274 |
| Cow position: | chr8:47949679-47949438 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 44-253 |
| Cow position: | chr8:34397518-34397302 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 44-253 |
| Cow position: | chr8:40108888-40108675 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 44-269 |
| Cow position: | chr8:3221562-3221795 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 32 |
| Conread position: | 45-311 |
| Cow position: | chr8:38276345-38276063 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 50-275 |
| Cow position: | chr8:52000058-51999823 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 168 |
| Conread position: | 51-274 |
| Cow position: | chr8:46593975-46593744 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 53-263 |
| Cow position: | chr8:45445677-45445453 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 30, 34 |
| Conread position: | 53-274 |
| Cow position: | chr8:46518494-46518266 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 54-268 |
| Cow position: | chr8:36921105-36920879 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 69-258 |
| Cow position: | chr8:45331387-45331197 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 78 |
Show alignments to all cow chromosomes.