Cow genome map
| Conread name: | Ss1.1-rpliv0118_i2.5 |
| Conread position: | 35-274 |
| Cow position: | chr9:9247283-9247037 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 41-265 |
| Cow position: | chr9:57301207-57301442 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 42-273 |
| Cow position: | chr9:19536662-19536905 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 42-274 |
| Cow position: | chr9:23297535-23297777 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 43-269 |
| Cow position: | chr9:13971589-13971359 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 44-274 |
| Cow position: | chr9:21742099-21742340 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 44-274 |
| Cow position: | chr9:35023329-35023096 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 45-255 |
| Cow position: | chr9:9889502-9889283 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 45-293 |
| Cow position: | chr9:17068307-17068560 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 53-252 |
| Cow position: | chr9:32738695-32738484 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-259 |
| Cow position: | chr9:43538280-43538497 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 56-269 |
| Cow position: | chr9:6373277-6373498 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 57-267 |
| Cow position: | chr9:43643284-43643499 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 58-248 |
| Cow position: | chr9:13117228-13117427 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 170-273 |
| Cow position: | chr9:2027761-2027864 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.