Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 2-283 |
| Cow position: | chr13:39983992-39984272 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 5-273 |
| Cow position: | chr13:39930911-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-293 |
| Cow position: | chr13:39930659-39930946 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 5-293 |
| Cow position: | chr13:39930743-39931030 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-293 |
| Cow position: | chr13:39930827-39931114 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-293 |
| Cow position: | chr13:56292184-56291900 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 6-285 |
| Cow position: | chr13:56292102-56291823 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 7-285 |
| Cow position: | chr13:39984501-39984778 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 14-285 |
| Cow position: | chr13:24162423-24162693 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 14-293 |
| Cow position: | chr13:39930584-39930862 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 17-285 |
| Cow position: | chr13:24162510-24162777 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 17-288 |
| Cow position: | chr13:39984343-39984613 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 42-252 |
| Cow position: | chr13:56333681-56333889 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 47-277 |
| Cow position: | chr13:39984121-39984350 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 47-288 |
| Cow position: | chr13:39984289-39984529 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 55-285 |
| Cow position: | chr13:39984633-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 67-285 |
| Cow position: | chr13:39983973-39984190 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 51 |
Show alignments to all cow chromosomes.