Cow genome map


           Conread name:
           Ss1.1-rpliv0127_b7.5
        

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               123, 111
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               112, 127
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               210, 125
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               125, 116
               

               Conread position:
               7-291
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               111, 127
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               12-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               16-284
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               55-283
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 64
               

               Conread position:
               56-285
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               56-285
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               56-290
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               68-285
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               66, 51
               
Show alignments to all cow chromosomes.