Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 5-283 |
| Cow position: | chr2:78755765-78756042 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 7-168 |
| Cow position: | chr2:78756188-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 109 |
| Conread position: | 7-279 |
| Cow position: | chr2:78755350-78755620 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 7-283 |
| Cow position: | chr2:78754361-78754634 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 7-283 |
| Cow position: | chr2:78754847-78755122 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 7-285 |
| Cow position: | chr2:78755099-78755375 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 7-285 |
| Cow position: | chr2:82800129-82800406 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 127, 112 |
| Conread position: | 7-292 |
| Cow position: | chr2:78754931-78755215 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 7-292 |
| Cow position: | chr2:78755015-78755299 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 7-292 |
| Cow position: | chr2:78755683-78755967 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 7-292 |
| Cow position: | chr2:82799709-82799993 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 125, 116 |
| Conread position: | 7-294 |
| Cow position: | chr2:78755517-78755802 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 282, 114 |
| Conread position: | 8-243 |
| Cow position: | chr2:82800214-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 8-286 |
| Cow position: | chr2:48689525-48689249 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 8-286 |
| Cow position: | chr2:82800046-82800323 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 8-292 |
| Cow position: | chr2:78755268-78755549 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 275, 69 |
| Conread position: | 8-292 |
| Cow position: | chr2:78755435-78755715 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 8-293 |
| Cow position: | chr2:78755184-78755467 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 13-288 |
| Cow position: | chr2:78754449-78754722 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 15-292 |
| Cow position: | chr2:78755943-78756220 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 43-293 |
| Cow position: | chr2:78754799-78755048 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 57-283 |
| Cow position: | chr2:78756070-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 92, 44 |
Show alignments to all cow chromosomes.