Cow genome map


           Conread name:
           Ss1.1-rpliv0127_b7.5
        

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 7
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               134, 118
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               203, 131
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               6-279
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               7-201
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               7-201
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               7-250
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               7-250
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               7-253
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               7-279
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               7-282
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               231, 109
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 112
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               125, 116
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               123, 112
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               105, 110
               

               Conread position:
               8-274
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               8-278
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               126, 110
               

               Conread position:
               8-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               8-302
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               11-296
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               14-291
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               14-294
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               15-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               17-274
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               17-285
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               50-279
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               56-283
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               56-287
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               57-286
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               63-292
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               63-298
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 56
               

               Conread position:
               68-289
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               140, 72
               

               Conread position:
               80-285
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 43
               
Show alignments to all cow chromosomes.